RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SNX20Q7Z614 316 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 AMZ2Q86W34 360 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 KMT5CQ86Y97 462 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 SFTPA2Q8IWL1 248 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 SLC25A41Q8N5S1 370 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 TRIM58Q8NG06 486 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 OR4K2Q8NGD2 314 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 OR2L2Q8NH16 312 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 ZNF398Q8TD17 642 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 BLOC1S5Q8TDH9 187 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 STYXQ8WUJ0 223 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 ALS2CR12Q96Q35 445 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 RANBP9Q96S59 729 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 CD180Q99467 661 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 CCM2Q9BSQ5 444 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 EFHD1Q9BUP0 239 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 FOXP3Q9BZS1 431 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 SPRY4Q9C004 299 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 VPS37BQ9H9H4 285 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 NLE1Q9NVX2 485 aaPredicted RBP6.2□□□□□ -1.42
SMG1-201ENST00000330588 PISDQ9UG56 409 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 KCNK6Q9Y257 313 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 PLEKHM1Q9Y4G2 1056 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 TMEM184BQ9Y519 407 aaPredicted RBP6.2□□□□□ -1.42
SMG1-201ENST00000330588 HEBP2Q9Y5Z4 205 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 CAPN6Q9Y6Q1 641 aa6.2□□□□□ -1.42
SMG1-201ENST00000330588 GOLGA4Q13439 2230 aaKnown RBP6.2□□□□□ -1.42
SMG1-201ENST00000330588 PRAMEF33A0A0G2JMD5 474 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 MROH6A6NGR9 719 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 KLK10O43240 276 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 LDB2O43679 373 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 LIASO43766 372 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 PRAMEF10O60809 474 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 EML2O95834 649 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 FTCDO95954 541 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 VIPP01282 170 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 FGF3P11487 239 aaPredicted RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 BRAFP15056 766 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 MSH3P20585 1137 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 FUT4P22083 530 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CAPZBP47756 277 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CD151P48509 253 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 PLOD1Q02809 727 aaPredicted RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 ACVR1Q04771 509 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CDH17Q12864 832 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 SEMA5AQ13591 1074 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 ITIH4Q14624 930 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 PLCL1Q15111 1095 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 TCEA2Q15560 299 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CCNG2Q16589 344 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 AMZ1Q400G9 498 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 ZNF658BQ4V348 819 aaPredicted RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 KHDC1Q4VXA5 237 aaKnown RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 DCAF12Q5T6F0 453 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 LYPLAL1Q5VWZ2 237 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 FAM151BQ6UXP7 276 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 PACS1Q6VY07 963 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CCDC81Q6ZN84 652 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 B4GALNT4Q76KP1 1039 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 NLRP9Q7RTR0 991 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 TRAPPC5Q8IUR0 188 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 TRIM48Q8IWZ4 208 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 NXPE1Q8N323 547 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 RASGEF1AQ8N9B8 481 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 GDAP1Q8TB36 358 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CCDC110Q8TBZ0 833 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 HM13Q8TCT9 377 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 UBXN4Q92575 508 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 USP7Q93009 1102 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 CXorf40BQ96DE9 158 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 ZDHHC12Q96GR4 267 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 FANCD2OSQ96PS1 177 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 OSGEPL1Q9H4B0 414 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 ZNF768Q9H5H4 540 aaKnown RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 RDH14Q9HBH5 336 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 PRDM8Q9NQV8 689 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 EIF2B3Q9NR50 452 aaKnown RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 HOMER3Q9NSC5 361 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 SIDT1Q9NXL6 827 aaKnown RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 ZNF624Q9P2J8 865 aaPredicted RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 SLC23A2Q9UGH3 650 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 DRG1Q9Y295 367 aaKnown RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 ARL5AQ9Y689 179 aa6.19□□□□□ -1.42
SMG1-201ENST00000330588 URB1O60287 2271 aaKnown RBP6.19□□□□□ -1.42
SMG1-201ENST00000330588 HEATR9A2RTY3 570 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PMS2P1A4D2B8 440 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 PDZK1P1A8MUH7 402 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MATN2O00339 956 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 POP7O75817 140 aaKnown RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 UBXN7O94888 489 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 GAS8O95995 478 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SLC4A1P02730 911 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 MSL3P1P0C860 447 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 SFTPCP11686 197 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ATP1B2P14415 290 aaPredicted RBP6.18□□□□□ -1.42
SMG1-201ENST00000330588 ITIH1P19827 911 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ACRV1P26436 265 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 ETV5P41161 510 aa6.18□□□□□ -1.42
SMG1-201ENST00000330588 CTSCP53634 463 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms