RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CLDN9O95484 217 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 RHOQP17081 205 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TCEA1P23193 301 aaKnown RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 MYF6P23409 242 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PLA2G16P53816 162 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 INCA1Q0VD86 236 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 ZNF789Q5FWF6 425 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 CCBE1Q6UXH8 406 aaPredicted RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 ZNF517Q6ZMY9 492 aaPredicted RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 MAVSQ7Z434 540 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 RAB42Q8N4Z0 105 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 C10orf53Q8N6V4 93 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TFAP2CQ92754 450 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 NTAN1Q96AB6 310 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TMEM246Q9BRR3 403 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PAK1IP1Q9NWT1 392 aaPredicted RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 NT5C1B-RDH14C9J2C7 533 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 AREL1O15033 823 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 KPNA6O60684 536 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 BCAS1O75363 584 aaPredicted RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 BMP2P12643 396 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TXNL4AP83876 142 aaKnown RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 DSC3Q14574 896 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 SIRPB2Q5JXA9 342 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 C6orf136Q5SQH8 315 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 ERAP2Q6P179 960 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PRR23CQ6ZRP0 262 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 CILP2Q8IUL8 1156 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 EEF1AKMT1Q8WVE0 214 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 BARD1Q99728 777 aaKnown RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 AASDHPPTQ9NRN7 309 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 KLHL28Q9NXS3 571 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 ABT1Q9ULW3 272 aaKnown RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 SNX7Q9UNH6 387 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PPP6CO00743 305 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 BEST1O76090 585 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 PRAMEF1O95521 474 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 NR2F1P10589 423 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 GALNT2Q10471 571 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 ATP6AP1Q15904 470 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 C5orf22Q49AR2 442 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 OR4F3Q6IEY1 312 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 USP30Q70CQ3 517 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TRAPPC5Q8IUR0 188 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 C11orf65Q8NCR3 313 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 HDAC2Q92769 488 aaKnown RBP13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TP53INP1Q96A56 240 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 CEP295NLQ96MC4 621 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 BBS4Q96RK4 519 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 TAF1P21675 1872 aa13.8□□□□□ -0.2
EPHB3-201ENST00000330394 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 PGRP06401 933 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 SH3BP2P78314 561 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 UNC50Q53HI1 259 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 TRIM40Q6P9F5 258 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 GALNT10Q86SR1 603 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 OSTM1Q86WC4 334 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 C2orf73Q8N5S3 287 aaPredicted RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 OR4F6Q8NGB9 312 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 BTN2A3PQ96KV6 586 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 TTYH2Q9BSA4 534 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 RNF6Q9Y252 685 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ANGPT4Q9Y264 503 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 AKAP11Q9UKA4 1901 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MAGEB17A8MXT2 336 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ALDH1A2O94788 518 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 GLUD1P00367 558 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CLCN2P51788 898 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CD47Q08722 323 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 SNAPC1Q16533 368 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MZT2AQ6P582 158 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 B3GNT9Q6UX72 402 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CYS1Q717R9 158 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ANKRD13BQ86YJ7 626 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 NPWQ8N729 165 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 PCYT2Q99447 389 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ITPAQ9BY32 194 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 ZDHHC6Q9H6R6 413 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 TBC1D17Q9HA65 648 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 MYH9P35579 1960 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 FFAR2O15552 330 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 KERAO60938 352 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 EDN1P05305 212 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 AGXTP21549 392 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 KCNA5P22460 613 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 PBX3P40426 434 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 BUD31P41223 144 aaPredicted RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 BNC1Q01954 994 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CHIT1Q13231 466 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 PLD1Q13393 1074 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 CHERPQ8IWX8 916 aaKnown RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 C2CD4AQ8NCU7 369 aaPredicted RBP13.79□□□□□ -0.2
EPHB3-201ENST00000330394 GRPEL2Q8TAA5 225 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 LRRC20Q8TCA0 184 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 PIK3R3Q92569 461 aa13.79□□□□□ -0.2
EPHB3-201ENST00000330394 COL26A1Q96A83 441 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms