RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 FAM171A2A8MVW0 826 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 EEF2KO00418 725 aaKnown RBP14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 PROM1O43490 865 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 MFAP3LO75121 409 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 H2AFZP0C0S5 128 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 MAXP61244 160 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 OGDHQ02218 1023 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 DMPKQ09013 629 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 RPE65Q16518 533 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 HADHQ16836 314 aaKnown RBP14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 RALGPS1Q5JS13 557 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 ZNF569Q5MCW4 686 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 H2AFVQ71UI9 128 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 DHX35Q9H5Z1 703 aaKnown RBP14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 C1GALT1Q9NS00 363 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 DTLQ9NZJ0 730 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 CTTNBP2NLQ9P2B4 639 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 UVRAGQ9P2Y5 699 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 CDC23Q9UJX2 597 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 ANAPC7Q9UJX3 599 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 GTF3C1Q12789 2109 aa14.26□□□□□ -0.13
CTHRC1-201ENST00000330295 TLN2Q9Y4G6 2542 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 C17orf113A0A1B0GUU1 675 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 OR6C74A6NCV1 312 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 LY6G6DO95868 133 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 CYP1A2P05177 515 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 VCLP18206 1134 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 MIPP30301 263 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 ARL4AP40617 200 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 SSR1P43307 286 aaKnown RBP14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 LMAN1P49257 510 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 EPHB1P54762 984 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 MYBPHQ13203 477 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 TUBB8Q3ZCM7 444 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 RHBDD2Q6NTF9 364 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 KIRREL2Q6UWL6 708 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 GPR135Q8IZ08 494 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 NPWQ8N729 165 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 PROKR1Q8TCW9 393 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 HAS2Q92819 552 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 ZWILCHQ9H900 591 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 ZNF358Q9NW07 568 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 COQ3Q9NZJ6 369 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 PKD2L2Q9NZM6 624 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 ADAM21Q9UKJ8 722 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 POMT2Q9UKY4 750 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 HS3ST3B1Q9Y662 390 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 HIVEP2P31629 2446 aa14.25□□□□□ -0.13
CTHRC1-201ENST00000330295 H3BRJ5 948 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 MAP3K7O43318 606 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 PEX11BO96011 259 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 DGKQP52824 942 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 NKAIN1Q4KMZ8 207 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 PPP6R3Q5H9R7 873 aaPredicted RBP14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 C11orf96Q7Z7L8 435 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 NIPA2Q8N8Q9 360 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 THAP3Q8WTV1 239 aaPredicted RBP14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 ZFPM2Q8WW38 1151 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 SNRNP25Q9BV90 132 aaKnown RBP14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 EDARQ9UNE0 448 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 AP1M2Q9Y6Q5 423 aa14.24□□□□□ -0.13
CTHRC1-201ENST00000330295 C1orf232A0A0U1RR37 186 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 RGSL1A5PLK6 1076 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 E9PLN8 166 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 TMEM253P0C7T8 217 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 ST6GAL1P15907 406 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 POLR2CP19387 275 aaPredicted RBP14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 MSX1P28360 303 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 HCAR3P49019 387 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 PMP22Q01453 160 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 TFF3Q07654 80 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 GALNT3Q14435 633 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 BBS5Q8N3I7 341 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 AGAP11Q8TF27 550 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 MBD6Q96DN6 1003 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 MRFAP1L1Q96HT8 127 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 DMRTA2Q96SC8 542 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 VKORC1Q9BQB6 163 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 SPATA16Q9BXB7 569 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 POLDIP3Q9BY77 421 aaKnown RBP14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 TRIM7Q9C029 511 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 IMP3Q9NV31 184 aaKnown RBP14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 PPT2Q9UMR5 302 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 PSMD13Q9UNM6 376 aa14.23□□□□□ -0.13
CTHRC1-201ENST00000330295 MTX2O75431 263 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 CTAG2O75638 210 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 CDK14O94921 469 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 HOXD4P09016 255 aaPredicted RBP14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 MTHFD1P11586 935 aaKnown RBP14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 ERCC2P18074 760 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 SOX11P35716 441 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 ZNF75DP51815 510 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 CACNG1Q06432 222 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 PRKAA1Q13131 559 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms