RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 GAPDHSO14556 408 aaPredicted RBP16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 TOR1BO14657 336 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 YY2O15391 372 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 HOXC4P09017 264 aaPredicted RBP16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 SLC1A6P48664 564 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 KIAA1024LP59773 190 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 ABCE1P61221 599 aaKnown RBP16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 CDK3Q00526 305 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 FOXK2Q01167 660 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 CSHL1Q14406 222 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 TECRLQ5HYJ1 363 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 RAET1GQ6H3X3 334 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 FAM151BQ6UXP7 276 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 ZNF765Q7L2R6 523 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 PIWIL4Q7Z3Z4 852 aaKnown RBP16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 RAB44Q7Z6P3 723 aaPredicted RBP16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 OR56A4Q8NGH8 313 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 STAG3L4Q8TBR4 150 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 STON2Q8WXE9 905 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 ZSCAN5AQ9BUG6 496 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 MECRQ9BV79 373 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 SCNM1Q9BWG6 230 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 TMEM168Q9H0V1 697 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 FAM83DQ9H4H8 585 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 ZDHHC3Q9NYG2 299 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 KCNK4Q9NYG8 393 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 NCKIPSDQ9NZQ3 722 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 KLQ9UEF7 1012 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 KLK13Q9UKR3 277 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 SCN8AQ9UQD0 1980 aa16.12■□□□□ 0.17
PDLIM1-201ENST00000329399 ARHGEF17Q96PE2 2063 aaPredicted RBP16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 CFAP99D6REC4 459 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 E5RI56 91 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 SLCO1B7G3V0H7 640 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 KPNA5O15131 536 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 INPP4BO15327 924 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 NPHS1O60500 1241 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 TPBGLP0DKB5 382 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 CA5AP35218 305 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 ACADVLP49748 655 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 IL2P60568 153 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 NFKB2Q00653 900 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 GALNT1Q10472 559 aaPredicted RBP16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 CHRNA6Q15825 494 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 ZNF648Q5T619 568 aaPredicted RBP16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 PTRHD1Q6GMV3 140 aaKnown RBP16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 TRAM1L1Q8N609 369 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 PIWIL2Q8TC59 973 aaKnown RBP16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 INPP5DQ92835 1189 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 KIAA1191Q96A73 305 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 CNDP1Q96KN2 507 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 APOLD1Q96LR9 279 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 PANX3Q96QZ0 392 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 COPS8Q99627 209 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 TRMOQ9BU70 441 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 CYP4F12Q9HCS2 524 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 ZNF358Q9NW07 568 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 XPR1Q9UBH6 696 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 TMPRSS11EQ9UL52 423 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 DHRS7Q9Y394 339 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 PLEKHM1Q9Y4G2 1056 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 LRP4O75096 1905 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 ZFHX4Q86UP3 3567 aa16.11■□□□□ 0.17
PDLIM1-201ENST00000329399 IGLV3-16A0A075B6K0 115 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CCT8L1PA6NM43 557 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CACNB4O00305 520 aaPredicted RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 SMIM24O75264 130 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 AP2A2O94973 939 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CBSLP0DN79 551 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 MYCLP1P12525 358 aaPredicted RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CD1DP15813 335 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 HTR1BP28222 390 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CBSP35520 551 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 GPR1P46091 355 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 RGS4P49798 205 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 TIAL1Q01085 375 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 DLG1Q12959 904 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 TTLL9Q3SXZ7 439 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 HENMT1Q5T8I9 393 aaKnown RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 DHRS13Q6UX07 377 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 ADAMTSL4Q6UY14 1074 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CCDC121Q6ZUS5 278 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 TRPM8Q7Z2W7 1104 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 ADAMTS14Q8WXS8 1223 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 DRC3Q9H069 523 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 NLGN3Q9NZ94 848 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 SPASTQ9UBP0 616 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CSNK1G3Q9Y6M4 447 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 DGKBQ9Y6T7 804 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 COL5A1P20908 1838 aaPredicted RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 PLXNB3Q9ULL4 1909 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 PRSS38A1L453 326 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 LMO7DNF2Z398 122 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 IPO13O94829 963 aaKnown RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 RASGRP1O95267 797 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CKMT2P17540 419 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CHRM3P20309 590 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 ARFIP2P53365 341 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 SHC2P98077 582 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms