RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 C9orf16Q9BUW7 83 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 WNT9AO14904 365 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 TSPAN6O43657 245 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 OPN1SWP03999 348 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 SRCP12931 536 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 C2orf80Q0P641 193 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 HKDC1Q2TB90 917 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 C6orf136Q5SQH8 315 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 RBM44Q6ZP01 1051 aaKnown RBP15.71■□□□□ 0.11
SYNM-201ENST00000328642 TMEM26Q6ZUK4 368 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 EID3Q8N140 333 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 ANKLE1Q8NAG6 615 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 FUBP1Q96AE4 644 aaKnown RBP15.71■□□□□ 0.11
SYNM-201ENST00000328642 C6orf203Q9P0P8 240 aaPredicted RBP15.71■□□□□ 0.11
SYNM-201ENST00000328642 RFXAPO00287 272 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 NFATC1O95644 943 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 POU2F1P14859 743 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 HLA-FP30511 346 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 PCBP2Q15366 365 aaKnown RBP eCLIP15.71■□□□□ 0.11
SYNM-201ENST00000328642 DGKKQ5KSL6 1271 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 PHYKPLQ8IUZ5 450 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 GPR26Q8NDV2 337 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 TSPAN14Q8NG11 270 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 JPH3Q8WXH2 748 aaPredicted RBP15.71■□□□□ 0.11
SYNM-201ENST00000328642 KCNN1Q92952 543 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 EXOSC8Q96B26 276 aaKnown RBP15.71■□□□□ 0.11
SYNM-201ENST00000328642 MAGEB10Q96LZ2 347 aaPredicted RBP15.71■□□□□ 0.11
SYNM-201ENST00000328642 KXD1Q9BQD3 176 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 MGME1Q9BQP7 344 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 DERL2Q9GZP9 239 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 OR51B5Q9H339 312 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 KCNK6Q9Y257 313 aa15.71■□□□□ 0.11
SYNM-201ENST00000328642 ANXA6P08133 673 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 CLK1P49759 484 aaKnown RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 GSK3BP49841 420 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 ABRAXAS2Q15018 415 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 CCDC85BQ15834 202 aaPredicted RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 ATAT1Q5SQI0 421 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 SULT1C3Q6IMI6 304 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 HDDC3Q8N4P3 179 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 CHID1Q9BWS9 393 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 AMBNQ9NP70 447 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 GREB1LQ9C091 1923 aaPredicted RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 ATP1B2P14415 290 aaPredicted RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 HMGCLP35914 325 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 HSPA13P48723 471 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 RPS14P62263 151 aaKnown RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 ERVK-8P63133 956 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 CYP4F3Q08477 520 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 CYP2A13Q16696 494 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 IER5LQ5T953 404 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 NCEH1Q6PIU2 408 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 PRR23CQ6ZRP0 262 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 SLC13A3Q8WWT9 602 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 KCNJ9Q92806 393 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 POLR1BQ9H9Y6 1135 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 C1orf109Q9NX04 203 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 IL17CQ9P0M4 197 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 OAZ3Q9UMX2 235 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 PRSS21Q9Y6M0 314 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 H3BN98 237 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 PRKACGP22612 351 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 CYP27C1Q4G0S4 372 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 TNIP2Q8NFZ5 429 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 RAD9AQ99638 391 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 HOPXQ9BPY8 73 aaPredicted RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 KLF16Q9BXK1 252 aaPredicted RBP15.7■□□□□ 0.1
SYNM-201ENST00000328642 UGT2B28Q9BY64 529 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 DHRS7Q9Y394 339 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 FADS3Q9Y5Q0 445 aa15.7■□□□□ 0.1
SYNM-201ENST00000328642 TMEM189-UBE2V1I3L0A0 370 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 EI24O14681 340 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 POP7O75817 140 aaKnown RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 PRNPP04156 253 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 EN2P19622 333 aaPredicted RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 GSTT1P30711 240 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 IFNA8P32881 189 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 IRS1P35568 1242 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 MTHFRP42898 656 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 TRIM71Q2Q1W2 868 aaKnown RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 DACT3Q96B18 629 aaPredicted RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 MCMBPQ9BTE3 642 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 IL36AQ9UHA7 158 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 SAMHD1Q9Y3Z3 626 aaKnown RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 GSAPA4D1B5 854 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 CD1EP15812 388 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 ADRA1AP35348 466 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 RAD23AP54725 363 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 CNTN1Q12860 1018 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 CCNIQ14094 377 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 LYPLAL1Q5VWZ2 237 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 CAPN13Q6MZZ7 669 aaPredicted RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 CRTC1Q6UUV9 634 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 MTSS1LQ765P7 747 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 SPATA19Q7Z5L4 167 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 METTL3Q86U44 580 aaKnown RBP15.69■□□□□ 0.1
SYNM-201ENST00000328642 BPIFB1Q8TDL5 484 aa15.69■□□□□ 0.1
SYNM-201ENST00000328642 NACC2Q96BF6 587 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms