RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 DPY19L1Q2PZI1 675 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 GDF6Q6KF10 455 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 HDAC2Q92769 488 aaKnown RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PPCDCQ96CD2 204 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PAAF1Q9BRP4 392 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 SDR39U1Q9NRG7 319 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 RAD18Q9NS91 495 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PHF24Q9UPV7 400 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 SATB2Q9UPW6 733 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 GSTK1Q9Y2Q3 226 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PQBP1O60828 265 aaKnown RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PGLSO95336 258 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 EIF2S1P05198 315 aaKnown RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 ANXA4P09525 319 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 GDF5P43026 501 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 GSTM5P46439 218 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 NFKB2Q00653 900 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 NAE1Q13564 534 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 BTG3Q14201 252 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 MYBPC3Q14896 1274 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 NUDT18Q6ZVK8 323 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 ZZZ3Q8IYH5 903 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 EBPLQ9BY08 206 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 LAMB2P55268 1798 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 A0A0J9YVX5 310 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 TAF4O00268 1085 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 OR10H3O60404 316 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 FGF4P08620 206 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CD36P16671 472 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 KCNAB2Q13303 367 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 TUBB3Q13509 450 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 OR4D1Q15615 310 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CARTPTQ16568 116 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 OR2T5Q6IEZ7 315 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 LILRA2Q8N149 483 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CENPSQ8N2Z9 138 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CLDN19Q8N6F1 224 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 OR10T2Q8NGX3 314 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 OR2T29Q8NH02 315 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 OR52J3Q8NH60 311 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PLD4Q96BZ4 506 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 ZC4H2Q9NQZ6 224 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 MTRRQ9UBK8 725 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 PCDHB3Q9Y5E6 796 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 STRCP1A6NGW2 1772 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 EFCAB9A8MZ26 197 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 EEDO75530 441 aaKnown RBP14.47□□□□□ -0.09
TCOF1-201ENST00000323668 MATN4O95460 622 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 TFPTP0C1Z6 253 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 DMPKQ09013 629 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 KCTD11Q693B1 232 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 GPR153Q6NV75 609 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CNTN4Q8IWV2 1026 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 TADA1Q96BN2 335 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 CHCHD6Q9BRQ6 235 aa14.47□□□□□ -0.09
TCOF1-201ENST00000323668 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.47□□□□□ -0.094e-6■□□□□ 11.1
TCOF1-201ENST00000323668 TCRBV3S1A0A5B6 114 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 FAM25AB3EWG3 89 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 FAM25CB3EWG5 89 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 FAM25GB3EWG6 89 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 IDH3BO43837 385 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 MAGEA10P43363 369 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-201ENST00000323668 C6orf141Q5SZD1 244 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 ADGRF1Q5T601 910 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 LYSMD3Q7Z3D4 306 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 TFAP2CQ92754 450 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 QRFPRQ96P65 431 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 AASDHPPTQ9NRN7 309 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 EXD2Q9NVH0 621 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 CMTM6Q9NX76 183 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 SOCS7O14512 581 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 UGT2B4P06133 528 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 CDK4P11802 303 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.09
TCOF1-201ENST00000323668 OR4D2P58180 307 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 SMIM11AP58511 58 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 USP39Q53GS9 565 aaKnown RBP14.46□□□□□ -0.09
TCOF1-201ENST00000323668 PIK3R6Q5UE93 754 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 LARP4Q71RC2 724 aaKnown RBP eCLIP14.46□□□□□ -0.091e-7■□□□□ 8.6
TCOF1-201ENST00000323668 ZMIZ2Q8NF64 920 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 FCGR1BQ92637 280 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 TRIM63Q969Q1 353 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 AMBNQ9NP70 447 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 GKN1Q9NS71 199 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 TESMINQ9Y4I5 508 aa14.46□□□□□ -0.09
TCOF1-201ENST00000323668 CLIC1O00299 241 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 TMCC2O75069 709 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 PLEKHG6Q3KR16 790 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 GPR33Q49SQ1 333 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 ZDHHC20Q5W0Z9 365 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 BEND5Q7L4P6 421 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 LUZP2Q86TE4 346 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 IPCEF1Q8WWN9 437 aaPredicted RBP14.46□□□□□ -0.1
TCOF1-201ENST00000323668 TNKS2Q9H2K2 1166 aa14.46□□□□□ -0.1
TCOF1-201ENST00000323668 CDV3Q9UKY7 258 aaKnown RBP14.46□□□□□ -0.1
TCOF1-201ENST00000323668 CENPXA8MT69 81 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 LOC730098B7Z3J9 87 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PDE9AO76083 593 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms