RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 MOCS1Q9NZB8 636 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 IL7RP16871 459 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF20P17024 532 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 RPIAP49247 311 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 NAE1Q13564 534 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 RGL4Q8IZJ4 473 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 PDLIM1O00151 329 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TPST2O60704 377 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 BPNT1O95861 308 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 LHCGRP22888 699 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 C12orf50Q8NA57 414 aaPredicted RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TESCQ96BS2 214 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 HIST1H2AAQ96QV6 131 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 EIF2B3Q9NR50 452 aaKnown RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 CLCN4P51793 760 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TMEM214Q6NUQ4 689 aaKnown RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 OXR1Q8N573 874 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TOP6BLQ8N6T0 577 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 PRICKLE1Q96MT3 831 aaPredicted RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 ATG10Q9H0Y0 220 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TRIM36Q9NQ86 728 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 RDH8Q9NYR8 311 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 LOXHD1Q8IVV2 1947 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 FGF19O95750 216 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 GSTT2P0CG29 244 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 DNAJA1P31689 397 aaKnown RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 LRRC52Q8N7C0 313 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 ADAM2Q99965 735 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 MAB21L2Q9Y586 359 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 PCDHGB6Q9Y5F9 930 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 SPATS1Q496A3 300 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 POMZP3Q6PJE2 187 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 TMEM109Q9BVC6 243 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 FAM124BQ9H5Z6 455 aaPredicted RBP16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 MAFFQ9ULX9 164 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 DERAQ9Y315 318 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 PCDHGB2Q9Y5G2 931 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 C8GP07360 202 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 CAMK1GQ96NX5 476 aa16.61■□□□□ 0.25
SMCHD1-201ENST00000320876 FXYD6-FXYD2A0A087WZ82 144 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 FAM234BA2RU67 622 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 CLCN7P51798 805 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 TPRG1LQ5T0D9 272 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 OR2AJ1Q8NGZ0 328 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 HTATIP2Q9BUP3 242 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 FXYD6Q9H0Q3 95 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PRORSD1PA6NEY8 169 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 GRM6O15303 877 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 CDKN2BP42772 138 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 MVKQ03426 396 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 TLR1Q15399 786 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 RFWD3Q6PCD5 774 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 FCRL2Q96LA5 508 aaPredicted RBP16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PWWP2AQ96N64 755 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 CLDN11O75508 207 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 GNAZP19086 355 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PLA2G4EQ3MJ16 856 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC44A3Q8N4M1 653 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 EBPLQ9BY08 206 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 ABCD2Q9UBJ2 740 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PTPN9P43378 593 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 KLHL26Q53HC5 615 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PPM1JQ5JR12 505 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 CSPG4P5Q96PW8 444 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 C8BP07358 591 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 MMP8P22894 467 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PPM1AP35813 382 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 ALG10Q5BKT4 473 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 RALGPS1Q5JS13 557 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 C1orf216Q8TAB5 229 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 BPIFB1Q8TDL5 484 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 MON1AQ86VX9 555 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 TBATAQ96M53 351 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 S100A10P60903 97 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 CES5AQ6NT32 575 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 MON1BQ7L1V2 547 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 PIGWQ7Z7B1 504 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 ITPAQ9BY32 194 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 RANBP3Q9H6Z4 567 aaPredicted RBP16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 POFUT2Q9Y2G5 429 aa16.6■□□□□ 0.25
SMCHD1-201ENST00000320876 CYP17A1P05093 508 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 MAN2A2P49641 1150 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 COX18Q8N8Q8 333 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC13A3Q8WWT9 602 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 POLR2J3Q9H1A7 115 aaKnown RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 SH3D21A4FU49 640 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 HERVK_113P63132 956 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 EN1Q05925 392 aaPredicted RBP16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 CFAP206Q8IYR0 622 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 OR5J2Q8NH18 312 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 ERVK-6Q9BXR3 956 aa16.59■□□□□ 0.25
SMCHD1-201ENST00000320876 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms