RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 GBA2Q9HCG7 927 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 TMPRSS4Q9NRS4 437 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 DNMT3AQ9Y6K1 912 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 TAF1P21675 1872 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 MTRF1O75570 445 aaKnown RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 HMBSP08397 361 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 HIST1H2AGP0C0S8 130 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 UROSP10746 265 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 HIST1H2ADP20671 130 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 CHRNA4P43681 627 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 TAF6P49848 677 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 GPAT3Q53EU6 434 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 OR2T5Q6IEZ7 315 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 ENPP6Q6UWR7 440 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 FAM9CQ8IZT9 166 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 OR2T29Q8NH02 315 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 VANGL1Q8TAA9 524 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 HIST1H2AHQ96KK5 128 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 HIST1H2AJQ99878 128 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 H2AFJQ9BTM1 129 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 VPS9D1Q9Y2B5 631 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 FAM92AA1XBS5 289 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 FAM220BPB1ANY3 271 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 CNTN5O94779 1100 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 GABARAPO95166 117 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 GSTM5P46439 218 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 C11orf88Q6PI97 169 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 CCDC117Q8IWD4 279 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 ARNTL2Q8WYA1 636 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 TMEM203Q969S6 136 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 DPCDQ9BVM2 203 aaPredicted RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 NXF3Q9H4D5 531 aaKnown RBP16.33■□□□□ 0.2
PACS1-201ENST00000320580 SMURF1Q9HCE7 757 aa16.33■□□□□ 0.2
PACS1-201ENST00000320580 B4GALT4O60513 344 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 SCO1O75880 301 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 MAPK1P28482 360 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 POU6F2P78424 691 aaPredicted RBP16.32■□□□□ 0.2
PACS1-201ENST00000320580 PTPRNQ16849 979 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 CRYGNQ8WXF5 182 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 PANX1Q96RD7 426 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 CCDC32Q9BV29 185 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 KLHL1Q9NR64 748 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 PDGFCQ9NRA1 345 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 E9PAM4 449 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 GSTM1P09488 218 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 CXCR2P25025 360 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 RPL35P42766 123 aaKnown RBP16.32■□□□□ 0.2
PACS1-201ENST00000320580 SLC26A2P50443 739 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 COL21A1Q96P44 957 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 NPEPPSL1A6NEC2 478 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 SUV39H1O43463 412 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 ZNF806P0C7X5 589 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 PKLRP30613 574 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 RENBPP51606 427 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 DEFA5Q01523 94 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 TAGLNQ01995 201 aaKnown RBP16.32■□□□□ 0.2
PACS1-201ENST00000320580 KIAA1614Q5VZ46 1190 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 BLOC1S3Q6QNY0 202 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 LACC1Q8IV20 430 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 POLR2J2Q9GZM3 115 aaKnown RBP16.32■□□□□ 0.2
PACS1-201ENST00000320580 GPBP1L1Q9HC44 474 aaPredicted RBP16.32■□□□□ 0.2
PACS1-201ENST00000320580 SH3BP4Q9P0V3 963 aa16.32■□□□□ 0.2
PACS1-201ENST00000320580 TNFRSF11BO00300 401 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CTDSP2O14595 271 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 BNIP3LO60238 219 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 SH3BGRLO75368 114 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 VTNP04004 478 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CYP2A7P20853 494 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 FBXO47Q5MNV8 452 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 NBPF12Q5TAG4 269 aaPredicted RBP16.31■□□□□ 0.2
PACS1-201ENST00000320580 ASB18Q6ZVZ8 466 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 TMEM135Q86UB9 458 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 PIM3Q86V86 326 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 COMMD7Q86VX2 200 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 SLC22A17Q8WUG5 538 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 TMEM125Q96AQ2 219 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 SPASTQ9UBP0 616 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 C2orf81A6NN90 581 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ARVCFO00192 962 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 USP17L7P0C7H9 530 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CYP2C18P33260 490 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 BEND5Q7L4P6 421 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ABCB8Q9NUT2 735 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 FADS2P1A8MWK0 482 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 POLR1CO15160 346 aaPredicted RBP16.31■□□□□ 0.2
PACS1-201ENST00000320580 CREG1O75629 220 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CDRT1O95170 752 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 MAZP56270 477 aaKnown RBP16.31■□□□□ 0.2
PACS1-201ENST00000320580 FGFBP1Q14512 234 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 SPATS1Q496A3 300 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 TBPL2Q6SJ96 375 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ARSKQ6UWY0 536 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ADGRD2Q7Z7M1 963 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 NKAPQ8N5F7 415 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms