RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 EFCAB1Q9HAE3 211 aa17.43■□□□□ 0.38
RAB39A-201ENST00000320578 GULP1Q9UBP9 304 aa17.43■□□□□ 0.38
RAB39A-201ENST00000320578 G3BP2Q9UN86 482 aaKnown RBP17.43■□□□□ 0.38
RAB39A-201ENST00000320578 LRRK1Q38SD2 2015 aa17.43■□□□□ 0.38
RAB39A-201ENST00000320578 ATP6AP2A0A1C7CYW4 349 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 A0A1W2PP55 124 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 MGAT4DA6NG13 374 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 MBTPS2O43462 519 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 ATP6AP2O75787 350 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 ALDOCP09972 364 aaKnown RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 HOXB2P14652 356 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 ITGAXP20702 1163 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 HNRNPH1P31943 449 aaKnown RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 TRIM23P36406 574 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 PCDH1Q08174 1060 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 RPA4Q13156 261 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 FASTKQ14296 549 aaKnown RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 SNCBQ16143 134 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 C16orf89Q6UX73 402 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 USP30Q70CQ3 517 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 TSPEARQ8WU66 669 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 MKRN2Q9H000 416 aaKnown RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 SDR39U1Q9NRG7 319 aaPredicted RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 FBXL12Q9NXK8 326 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 FZD4Q9ULV1 537 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 H3BM21 787 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 H3BQ06 376 aaPredicted RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 RNASEH2AO75792 299 aaKnown RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 KLF8O95600 359 aaPredicted RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 ZNF8P17098 575 aaPredicted RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 GPX3P22352 226 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 GDF5P43026 501 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 SLC25A3Q00325 362 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 CDK3Q00526 305 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 CUL3Q13618 768 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 PGM2L1Q6PCE3 622 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 PACS2Q86VP3 889 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 TRAPPC5Q8IUR0 188 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 ZNF547Q8IVP9 402 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 PLA2G15Q8NCC3 412 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 CFAP61Q8NHU2 1237 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 HMGCLL1Q8TB92 370 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 MARK4Q96L34 752 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 GAS2L1Q99501 681 aaPredicted RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 SLC25A23Q9BV35 468 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 DENND2DQ9H6A0 471 aaPredicted RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 PREBQ9HCU5 417 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 SERGEFQ9UGK8 458 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 PRPF19Q9UMS4 504 aaKnown RBP17.42■□□□□ 0.38
RAB39A-201ENST00000320578 BTRCQ9Y297 605 aa17.42■□□□□ 0.38
RAB39A-201ENST00000320578 CDH23Q9H251 3354 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 A0A088AWK7 358 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 ARHGEF33A8MVX0 844 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 POP7O75817 140 aaKnown RBP17.41■□□□□ 0.38
RAB39A-201ENST00000320578 CLDN9O95484 217 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 HMOX2P30519 316 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 ERVK-8P63133 956 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 TMEM259Q4ZIN3 620 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 MBOAT1Q6ZNC8 495 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 NET1Q7Z628 596 aaPredicted RBP17.41■□□□□ 0.38
RAB39A-201ENST00000320578 C11orf96Q7Z7L8 435 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 KBTBD6Q86V97 674 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 HEATR4Q86WZ0 1026 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 ULK2Q8IYT8 1036 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 MIER2Q8N344 545 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 L3MBTL4Q8NA19 623 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 THTPAQ9BU02 230 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 PHF7Q9BWX1 381 aaPredicted RBP17.41■□□□□ 0.38
RAB39A-201ENST00000320578 C1QTNF7Q9BXJ2 289 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 HEBP1Q9NRV9 189 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 DNAJC11Q9NVH1 559 aa17.41■□□□□ 0.38
RAB39A-201ENST00000320578 ZFR2Q9UPR6 939 aaKnown RBP17.41■□□□□ 0.38
RAB39A-201ENST00000320578 SERTM1A2A2V5 107 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 SLC28A1O00337 649 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 UGDHO60701 494 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 SNRPB2P08579 225 aaKnown RBP17.4■□□□□ 0.38
RAB39A-201ENST00000320578 PCSK2P16519 638 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 EPORP19235 508 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 ZNF33BQ06732 778 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 ABRQ12979 859 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 GRB7Q14451 532 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 ZXDCQ2QGD7 858 aaPredicted RBP17.4■□□□□ 0.38
RAB39A-201ENST00000320578 PTCHD3Q3KNS1 767 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 XKR5Q6UX68 686 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 Q6ZSR9 355 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 TRIM46Q7Z4K8 759 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 TRIM74Q86UV6 250 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 OXR1Q8N573 874 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 TP53I13Q8NBR0 393 aaPredicted RBP17.4■□□□□ 0.38
RAB39A-201ENST00000320578 CDK15Q96Q40 435 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 BRINP2Q9C0B6 783 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 LIMD1Q9UGP4 676 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 BAIAP2L1Q9UHR4 511 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 GPR45Q9Y5Y3 372 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 PTGDR2Q9Y5Y4 395 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 BBIP1A8MTZ0 92 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 A8MUI8 341 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 MEI4A8MW99 385 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
RAB39A-201ENST00000320578 LMNAP02545 664 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms