RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 NXPE1Q8N323 547 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 HAUS1Q96CS2 278 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 DCUN1D1Q96GG9 259 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 TRAPPC9Q96Q05 1148 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 FERMT1Q9BQL6 677 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 DHRS4Q9BTZ2 278 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 HEMGNQ9BXL5 484 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 CHRNA10Q9GZZ6 450 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 ARNT2Q9HBZ2 717 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 FAM8A1Q9UBU6 413 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 SERTAD3Q9UJW9 196 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 AMFRQ9UKV5 643 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 G3BP2Q9UN86 482 aaKnown RBP13.79□□□□□ -0.2
RPP40-201ENST00000319533 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
RPP40-201ENST00000319533 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
RPP40-201ENST00000319533 ITPR2Q14571 2701 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 TRBV5-4A0A0C4DH59 114 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 WIPF3A6NGB9 483 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 ZNF185O15231 689 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 DDX3YO15523 660 aaKnown RBP13.78□□□□□ -0.2
RPP40-201ENST00000319533 KLF7O75840 302 aaPredicted RBP13.78□□□□□ -0.2
RPP40-201ENST00000319533 CRTAMO95727 393 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
RPP40-201ENST00000319533 HBQ1P09105 142 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 ATP1B2P14415 290 aaPredicted RBP13.78□□□□□ -0.2
RPP40-201ENST00000319533 CYP2A7P20853 494 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 HADHAP40939 763 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 RPA4Q13156 261 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 GPR33Q49SQ1 333 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
RPP40-201ENST00000319533 FAM69BQ5VUD6 431 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 ITPRIPL1Q6GPH6 555 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 SNX20Q7Z614 316 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 ADGRF3Q8IZF5 1079 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 UBL4BQ8N7F7 174 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 LRRC57Q8N9N7 239 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 OR52E1Q8NGJ3 308 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 OR13C4Q8NGS5 318 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 IP6K3Q96PC2 410 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 FERD3LQ96RJ6 166 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 COPS8Q99627 209 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 SLC29A3Q9BZD2 475 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 OSBPL8Q9BZF1 889 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 TSGA10Q9BZW7 698 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 MVB12BQ9H7P6 319 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 SLAMF7Q9NQ25 335 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 GPR83Q9NYM4 423 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 EFR3BQ9Y2G0 817 aa13.78□□□□□ -0.2
RPP40-201ENST00000319533 GSAPA4D1B5 854 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 C2orf74A8MZ97 194 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 MIF4GDA9UHW6 222 aaKnown RBP13.77□□□□□ -0.21
RPP40-201ENST00000319533 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 E7EQ34 232 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 H7C0S8 307 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 IFRD1O00458 451 aaPredicted RBP13.77□□□□□ -0.21
RPP40-201ENST00000319533 ZNF749O43361 778 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 GSTM1P09488 218 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 ITGALP20701 1170 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 PTPN7P35236 360 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 LMAN1P49257 510 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 GSTM4Q03013 218 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 MRPL49Q13405 166 aaKnown RBP13.77□□□□□ -0.21
RPP40-201ENST00000319533 OLIG2Q13516 323 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 ATP1A4Q13733 1029 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 BOP1Q14137 746 aaKnown RBP13.77□□□□□ -0.21
RPP40-201ENST00000319533 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 CDHR3Q6ZTQ4 885 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 AMIGO1Q86WK6 493 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 RAB43Q86YS6 212 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 NRTNQ99748 197 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 C17orf62Q9BQA9 187 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 APOL2Q9BQE5 337 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 C10orf88Q9H8K7 445 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 ZDHHC3Q9NYG2 299 aa13.77□□□□□ -0.21
RPP40-201ENST00000319533 FEZ2Q9UHY8 353 aaPredicted RBP13.77□□□□□ -0.21
RPP40-201ENST00000319533 CENPEQ02224 2701 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 C9J4A7 227 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 H7C0C1 242 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 MAP3K7O43318 606 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 LDB2O43679 373 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 NRDCO43847 1150 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 TJP3O95049 919 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 PSMB4P28070 264 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 PDHA2P29803 388 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 ATP5OP48047 213 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 GABRA4P48169 554 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 SSPNQ14714 243 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
RPP40-201ENST00000319533 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 VWA5B1Q5TIE3 1220 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 IGFL3Q6UXB1 125 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
RPP40-201ENST00000319533 PHC3Q8NDX5 983 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
RPP40-201ENST00000319533 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms