RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 KLHL31Q9H511 634 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 SQORQ9Y6N5 450 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 COMMD3-BMI1R4GMX3 469 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 MPZL2O60487 215 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 PTPN5P54829 565 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 RPL26P61254 145 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 FOXM1Q08050 763 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 RAPSNQ13702 412 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 PAFAH1B3Q15102 231 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 DENND5AQ6IQ26 1287 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 Q6ZVU0 165 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 SMOQ99835 787 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 ANKHQ9HCJ1 492 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 UPK3BL1B0FP48 263 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 ANKRD66B4E2M5 251 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 UPK3BL2E5RIL1 263 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 LIN7AO14910 233 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 RGS10O43665 173 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 FGF18O76093 207 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 SYN1P17600 705 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 PRPS1L1P21108 318 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 KHKP50053 298 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 TAS2R50P59544 299 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 SEMG2Q02383 582 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 MYLK3Q32MK0 819 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 LACTB2Q53H82 288 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 SIRPB2Q5JXA9 342 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 IRF7Q92985 503 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 TMEM138Q9NPI0 162 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 RASSF1Q9NS23 344 aa11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 THUMPD1Q9NXG2 353 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-201ENST00000314845 HAS3O00219 553 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 CASKO14936 926 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SCAMP1O15126 338 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PCDH7O60245 1069 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 IL12BP29460 328 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ACVRL1P37023 503 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 MNDAP41218 407 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 RPS9P46781 194 aaKnown RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SLC35G1Q2M3R5 365 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PYDC2Q56P42 97 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 POC5Q8NA72 575 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 GNEQ9Y223 722 aaKnown RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 OR51F1A6NGY5 319 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 C9JVG2 144 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 TLX3O43711 291 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 IL7RP16871 459 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PCDH1Q08174 1060 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 GALNT2Q10471 571 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 CHRNA6Q15825 494 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 HKDC1Q2TB90 917 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 EOGTQ5NDL2 527 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 GALNT5Q7Z7M9 940 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 NEK7Q8TDX7 302 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 GIPC3Q8TF64 312 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 RFKQ969G6 155 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PLEKHG4BQ96PX9 1271 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ABCB10Q9NRK6 738 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 MPIP34949 423 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 EIF2B2P49770 351 aaKnown RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 EIPR1Q53HC9 387 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF311Q5JNZ3 666 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ZDHHC24Q6UX98 284 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF572Q7Z3I7 529 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SLC30A8Q8IWU4 369 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 OVCA2Q8WZ82 227 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SMPDL3AQ92484 453 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 OTUB2Q96DC9 234 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 CCM2Q9BSQ5 444 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 BTBD1Q9H0C5 482 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 J3KR12 359 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 STX16O14662 325 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 NME6O75414 186 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 TNFRSF21O75509 655 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ALPIP09923 528 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 CSNK2A2P19784 350 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PSMA1P25786 263 aaKnown RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SLBPQ14493 270 aaKnown RBP eCLIP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 QPRTQ15274 297 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 INAVAQ3KP66 663 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PRAMEF14Q5SWL7 426 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 PRAMEF13Q5VWM6 474 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 LPCAT4Q643R3 524 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SMYD5Q6GMV2 418 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 SVOPLQ8N434 492 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 NSMCE3Q96MG7 304 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 VPS29Q9UBQ0 182 aa11.75□□□□□ -0.53
AMBRA1-201ENST00000314845 LMO7Q8WWI1 1683 aa11.74□□□□□ -0.53
AMBRA1-201ENST00000314845 A0A1W2PRB8 838 aa11.74□□□□□ -0.53
AMBRA1-201ENST00000314845 CCNB2O95067 398 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms