RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FXYD1O00168 92 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 TPST1O60507 370 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 RSL1D1O76021 490 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 PBLDP30039 288 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 NNMTP40261 264 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 GRIA3P42263 894 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 RPL38P63173 70 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 AP5B1Q2VPB7 878 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 C6orf10Q5SRN2 563 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 SLC2A7Q6PXP3 512 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 BLOC1S3Q6QNY0 202 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 UBE2R2Q712K3 238 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 AHI1Q8N157 1196 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 CBARPQ8N350 705 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 RNF175Q8N4F7 328 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 LMNTD1Q8N9Z9 388 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ASB9Q96DX5 294 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ZNF641Q96N77 438 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 FAM83DQ9H4H8 585 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 INTS7Q9NVH2 962 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 AIG1Q9NVV5 245 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PDE10AQ9Y233 779 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 V9GYQ6 96 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 TULP3O75386 442 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 SLC22A3O75751 556 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 SLC2A4P14672 509 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 TIMP2P16035 220 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 ITPKAP23677 461 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 SLC5A2P31639 672 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 KCNK10P57789 538 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 NFYCQ13952 458 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNF4-201ENST00000314289 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
RNF4-201ENST00000314289 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 PCYOX1LQ8NBM8 494 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 PDPRQ8NCN5 879 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 PROKR1Q8TCW9 393 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 RBM38Q9H0Z9 239 aaKnown RBP12.16□□□□□ -0.46
RNF4-201ENST00000314289 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 TBC1D14Q9P2M4 693 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 SUN2Q9UH99 717 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 RAB26Q9ULW5 256 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 AGAP14A8MT82 685 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 MTHFD1P11586 935 aaKnown RBP12.16□□□□□ -0.46
RNF4-201ENST00000314289 ADH5P11766 374 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 NCK1P16333 377 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 ZFP36L2P47974 494 aaKnown RBP12.16□□□□□ -0.46
RNF4-201ENST00000314289 PREPP48147 710 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 NRIP1P48552 1158 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 POLR2LP62875 67 aaKnown RBP12.16□□□□□ -0.46
RNF4-201ENST00000314289 SPPL2CQ8IUH8 684 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 SLC15A3Q8IY34 581 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 LRTOMTQ8WZ04 291 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 ELMO1Q92556 727 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 LRRC58Q96CX6 371 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 CMTM6Q9NX76 183 aa12.16□□□□□ -0.46
RNF4-201ENST00000314289 TCF20Q9UGU0 1960 aaKnown RBP12.16□□□□□ -0.46
RNF4-201ENST00000314289 F5P12259 2224 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ARHGAP10A1A4S6 786 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 CCDC154A6NI56 674 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 SH3BGRLO75368 114 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 OTCP00480 354 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 HNRNPCP07910 306 aaKnown RBP eCLIP12.15□□□□□ -0.464e-7■□□□□ 10.8
RNF4-201ENST00000314289 OR56A5P0C7T3 313 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 PRR35P0CG20 571 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ATP1B2P14415 290 aaPredicted RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 ATP6V1B2P21281 511 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 SLC6A2P23975 617 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 PBX2P40425 430 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ERVK-8P63133 956 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ABRQ12979 859 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ACOX1Q15067 660 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 TTLL9Q3SXZ7 439 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ULK4Q96C45 1275 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 CEP44Q9C0F1 390 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 SLC52A3Q9NQ40 469 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 CD300AQ9UGN4 299 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 RIMS3Q9UJD0 308 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 AURKCQ9UQB9 309 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 TNPO3Q9Y5L0 923 aaKnown RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 SNX13Q9Y5W8 968 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 A0A1W2PQ67 120 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 C16orf96A6NNT2 1141 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 LSM1O15116 133 aaKnown RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 DDX6P26196 483 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNF4-201ENST00000314289 ATP4BP51164 291 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 POLR2JP52435 117 aaKnown RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 CTSCP53634 463 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 DNAJC14Q6Y2X3 702 aaPredicted RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 P2RY13Q9BPV8 354 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 NUSAP1Q9BXS6 441 aaKnown RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 PRM3Q9NNZ6 103 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 RIC8BQ9NVN3 520 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 PKD2L2Q9NZM6 624 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 EPS15L1Q9UBC2 864 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms