RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NCOR1O75376 2440 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 USP17L7P0C7H9 530 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CCNYL3P0C7X3 344 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 RNH1P13489 461 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 BUD31P41223 144 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 MAGEA11P43364 429 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 RPP38P78345 283 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SCML4Q8N228 414 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 C1orf52Q8N6N3 182 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 HDAC10Q969S8 669 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 DGCR6LQ9BY27 220 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ANKRD60Q9BZ19 345 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TMEM184CQ9NVA4 438 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CAPN8A6NHC0 703 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TFECO14948 347 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 UBXN7O94888 489 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 IL1RNP18510 177 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SPIBQ01892 262 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 GTF2H2Q13888 395 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 DSG2Q14126 1118 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 QPCTQ16769 361 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SGO1Q5FBB7 561 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 OGFRL1Q5TC84 451 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 GTF2H2CQ6P1K8 395 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ITPAQ9BY32 194 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 MYNNQ9NPC7 610 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 KLQ9UEF7 1012 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TSR3Q9UJK0 312 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 LY75O60449 1722 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ACPPP15309 386 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 PEX2P28328 305 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 PYDC2Q56P42 97 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 KLHDC10Q6PID8 442 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 RHBDF2Q6PJF5 856 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 RTL4Q6ZR62 310 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 RAVER1Q8IY67 606 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 PHACTR4Q8IZ21 702 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 GDPD1Q8N9F7 314 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 INO80EQ8NBZ0 244 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 RMI1Q9H9A7 625 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 MTMR10Q9NXD2 777 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TDRD6O60522 2096 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 BLACEA4D250 179 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ARF4P18085 180 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 UGT1A3P35503 534 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 E2F2Q14209 437 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SH3PXD2AQ5TCZ1 1133 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 DHRS4Q9BTZ2 278 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 POP4O95707 220 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 IL3P08700 152 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 NR2F1P10589 423 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ACADMP11310 421 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 USP4Q13107 963 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF404Q494X3 552 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ALYREFQ86V81 257 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 BORCS6Q96GS4 357 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 TSC2P49815 1807 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 DDTLA6NHG4 134 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 PAGE1O75459 146 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 S100A6P06703 90 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 NFICP08651 508 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 EBLN1P0CF75 366 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF3P17036 446 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 SLC1A2P43004 574 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 AQP4P55087 323 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ACTA2P62736 377 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ACTG2P63267 376 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 OGFOD2Q6N063 350 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ZBTB2Q8N680 514 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 OTUB2Q96DC9 234 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 GATA5Q9BWX5 397 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ULBP1Q9BZM6 244 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 POLR2J2Q9GZM3 115 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 POLR2J3Q9H1A7 115 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 GBA2Q9HCG7 927 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 K7EPI3 171 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 SLITRK5O94991 958 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 PRAMEF12O95522 483 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ZBTB11O95625 1053 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 FGF4P08620 206 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 KCTD8Q6ZWB6 473 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 LRRC71Q8N4P6 559 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 MGAT4BQ9UQ53 548 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 EXOSC1Q9Y3B2 195 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 INSIG1O15503 277 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 PGK1P00558 417 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 CXCR3P49682 368 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 FRMD7Q6ZUT3 714 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ADAMTS18Q8TE60 1221 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 AP2M1Q96CW1 435 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 KCTD12Q96CX2 325 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 MED8Q96G25 268 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 COMMD4Q9H0A8 199 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 MS4A12Q9NXJ0 267 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 NAP1L6A6NFF2 107 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 FOXO6A8MYZ6 492 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 CACNB4O00305 520 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 TMEM135Q86UB9 458 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 NLRP8Q86W28 1048 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms