RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 OR2L2Q8NH16 312 aa16.34■□□□□ 0.21
CLCF1-201ENST00000312438 CFAP61Q8NHU2 1237 aa16.34■□□□□ 0.21
CLCF1-201ENST00000312438 ATL1Q8WXF7 558 aa16.34■□□□□ 0.21
CLCF1-201ENST00000312438 FBXL8Q96CD0 374 aa16.34■□□□□ 0.21
CLCF1-201ENST00000312438 CCDC138Q96M89 665 aa16.34■□□□□ 0.21
CLCF1-201ENST00000312438 UBE2ZQ9H832 354 aaPredicted RBP16.34■□□□□ 0.21
CLCF1-201ENST00000312438 ZFR2Q9UPR6 939 aaKnown RBP16.34■□□□□ 0.21
CLCF1-201ENST00000312438 MGAT4DA6NG13 374 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 CHUKO15111 745 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 PRR35P0CG20 571 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 PDHA2P29803 388 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 HMOX2P30519 316 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 TRIM23P36406 574 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 SLC6A12P48065 614 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 ACADVLP49748 655 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 STX1BP61266 288 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 SFSWAPQ12872 951 aaKnown RBP16.33■□□□□ 0.21
CLCF1-201ENST00000312438 CUL3Q13618 768 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 FASTKQ14296 549 aaKnown RBP16.33■□□□□ 0.21
CLCF1-201ENST00000312438 SIPA1Q96FS4 1042 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 MSANTD3Q96H12 275 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 THTPAQ9BU02 230 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 TEX101Q9BY14 249 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 EFCAB1Q9HAE3 211 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 CD248Q9HCU0 757 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 TMEM98Q9Y2Y6 226 aa16.33■□□□□ 0.21
CLCF1-201ENST00000312438 DNMT3AQ9Y6K1 912 aaPredicted RBP16.33■□□□□ 0.21
CLCF1-201ENST00000312438 ARHGEF33A8MVX0 844 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 LOC730098B7Z3J9 87 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 ALDOCP09972 364 aaKnown RBP16.33■□□□□ 0.2
CLCF1-201ENST00000312438 C7P10643 843 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 CD1EP15812 388 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 RAP1GDS1P52306 607 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 STX5Q13190 355 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 PTK2BQ14289 1009 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 GRB7Q14451 532 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 INPP5AQ14642 412 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 GSTA3Q16772 222 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 ZXDCQ2QGD7 858 aaPredicted RBP16.33■□□□□ 0.2
CLCF1-201ENST00000312438 PTCHD3Q3KNS1 767 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 MAP7D1Q3KQU3 841 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.2
CLCF1-201ENST00000312438 WASHC2DQ5SRD0 308 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 IL27RAQ6UWB1 636 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 KBTBD6Q86V97 674 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 SCUBE1Q8IWY4 988 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 DPEP2Q9H4A9 486 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 MBNL1Q9NR56 388 aaKnown RBP16.33■□□□□ 0.2
CLCF1-201ENST00000312438 TRPS1Q9UHF7 1281 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 BAIAP2L1Q9UHR4 511 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 NCKAP1Q9Y2A7 1128 aa16.33■□□□□ 0.2
CLCF1-201ENST00000312438 A8MUI8 341 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 MEI4A8MW99 385 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 AIM2O14862 343 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 PEX11AO75192 247 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 WDR47O94967 919 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 CLDN9O95484 217 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 ATP6V1G2O95670 118 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 GRIK2Q13002 908 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 FGL2Q14314 439 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 AGKQ53H12 422 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 EOGTQ5NDL2 527 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 NEK5Q6P3R8 708 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 SCIMPQ6UWF3 145 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 RNF165Q6ZSG1 346 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 USP30Q70CQ3 517 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 C11orf96Q7Z7L8 435 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 KYQ8NBH2 561 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 FBXO15Q8NCQ5 510 aaPredicted RBP16.32■□□□□ 0.2
CLCF1-201ENST00000312438 HM13Q8TCT9 377 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 LGR4Q9BXB1 951 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 C1QTNF7Q9BXJ2 289 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 SLC17A9Q9BYT1 436 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 SLC6A17Q9H1V8 727 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 FZD4Q9ULV1 537 aa16.32■□□□□ 0.2
CLCF1-201ENST00000312438 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.32■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3DA0A087WVF3 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3IA0A087WXS9 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3EA0A087X179 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3KA0A087X1G2 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 A0A1W2PQU0 124 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3FA6NER0 549 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 GPR89AB7ZAQ6 455 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3LB9A6J9 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 RNGTTO60942 597 aaKnown RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3HP0C7X1 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 GPR89BP0CG08 455 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 IDO1P14902 403 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ITGAXP20702 1163 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 HNRNPH1P31943 449 aaKnown RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SKIV2LQ15477 1246 aaKnown RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TMEM259Q4ZIN3 620 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TCHHL1Q5QJ38 904 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 IER5LQ5T953 404 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3GQ6DHY5 549 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3CQ6IPX1 549 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms