RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PAQR3Q6TCH7 311 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 NAPRTQ6XQN6 538 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 VRK3Q8IV63 474 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 FBXO15Q8NCQ5 510 aaPredicted RBP17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 RAD51AP1Q96B01 352 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 FAM136AQ96C01 138 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 OLFM1Q99784 485 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 DHRS4Q9BTZ2 278 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 EPB41L4BQ9H329 900 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 TOR4AQ9NXH8 423 aa17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 PSMC3IPQ9P2W1 217 aaPredicted RBP17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 MTO1Q9Y2Z2 717 aaKnown RBP17.44■□□□□ 0.38
SSSCA1-201ENST00000309328 TMX2-CTNND1H3BSU7 103 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 CTIFO43310 598 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 ZBTB14O43829 449 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 OPA1O60313 960 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 PSIP1O75475 530 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 PIAS1O75925 651 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 UBXN7O94888 489 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 F7P08709 466 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 SAT1P21673 171 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 MAP4P27816 1152 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 SHMT2P34897 504 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 ABCG1P45844 678 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 TIAL1Q01085 375 aaKnown RBP eCLIP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 TAF1BQ53T94 588 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 ADGRD1Q6QNK2 874 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 WDR74Q6RFH5 385 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 PIM3Q86V86 326 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 TDRPQ86YL5 185 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 ASB11Q8WXH4 323 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 LINGO1Q96FE5 620 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 LRRN3Q9H3W5 708 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 OR6C2Q9NZP2 312 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 GALPQ9UBC7 116 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 CFAP20Q9Y6A4 193 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 PIKFYVEQ9Y2I7 2098 aa17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 GOLGA4Q13439 2230 aaKnown RBP17.43■□□□□ 0.38
SSSCA1-201ENST00000309328 IGHV1OR21-1A0A087WYE8 117 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 A0A087X1B8 175 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 SPAARA0A1B0GVQ0 90 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 DCDC2BA2VCK2 349 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ZNF839A8K0R7 811 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 GFYI3L273 518 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 NTN3O00634 580 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 CPNE6O95741 557 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 SNRPAP09012 282 aaKnown RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ENO2P09104 434 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 CYP2A7P20853 494 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 CAPZBP47756 277 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ATP6V0D1P61421 351 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ABRQ12979 859 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 SPIDRQ14159 915 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 PPM1JQ5JR12 505 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 PERM1Q5SV97 790 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 MROH9Q5TGP6 573 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 RAPH1Q70E73 1250 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 CROCCP2Q86T23 111 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 OOSP2Q86WS3 158 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 PLXDC1Q8IUK5 500 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 SFTPA2Q8IWL1 248 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 GALNT15Q8N3T1 639 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 RIBC1Q8N443 379 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 DCAKDQ8WVC6 231 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 HNRNPLLQ8WVV9 542 aaKnown RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 LCN9Q8WX39 176 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ADAMTS14Q8WXS8 1223 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ISL2Q96A47 359 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 CABS1Q96KC9 395 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 GFM1Q96RP9 751 aaKnown RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 SLC30A3Q99726 388 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 TRIM54Q9BYV2 358 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ROPN1BQ9BZX4 212 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 DERL2Q9GZP9 239 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 RAB33BQ9H082 229 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 ROPN1Q9HAT0 212 aaPredicted RBP17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 LNPEPQ9UIQ6 1025 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 TLK1Q9UKI8 766 aa17.42■□□□□ 0.38
SSSCA1-201ENST00000309328 PCNX2A6NKB5 2137 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 CDH16O75309 829 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 FAM155BO75949 473 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 C1orf105O95561 183 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 RPLP0P05388 317 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 PROS1P07225 676 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 MYF5P13349 255 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 AMD1P17707 334 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 TYK2P29597 1187 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 RAB28P51157 221 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 IFFO1Q0D2I5 559 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 PRKAA1Q13131 559 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 ARHGAP19Q14CB8 494 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 RBM44Q6ZP01 1051 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 DGLUCYQ7Z3D6 616 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 ADAMTSL2Q86TH1 951 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 TBC1D1Q86TI0 1168 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 LCA5Q86VQ0 697 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 TMPRSS12Q86WS5 348 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms