RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SNRPAP09012 282 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 SLC2A3P11169 496 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 EN2P19622 333 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 ACKR3P25106 362 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ATP5A1P25705 553 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 RARRES1P49788 294 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 LIMK2P53671 638 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ALDH18A1P54886 795 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 GABPAQ06546 454 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CDK18Q07002 472 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PAK1Q13153 545 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ILKQ13418 452 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SNAI3Q3KNW1 292 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ZCWPW2Q504Y3 356 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ZNF569Q5MCW4 686 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 FAM171A1Q5VUB5 890 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 LRRN1Q6UXK5 716 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TOMM20LQ6UXN7 152 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 C15orf39Q6ZRI6 1047 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 C16orf62Q7Z3J2 963 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TRIM46Q7Z4K8 759 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PHYKPLQ8IUZ5 450 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 MFN1Q8IWA4 741 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 LEMD2Q8NC56 503 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 C2CD4AQ8NCU7 369 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 HPSE2Q8WWQ2 592 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ASB10Q8WXI3 467 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 FBXW5Q969U6 566 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 COA7Q96BR5 231 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 COQ8BQ96D53 544 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 WBP1Q96G27 269 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 HSPA12BQ96MM6 686 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 P2RX7Q99572 595 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 FSD1Q9BTV5 496 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 FOXQ1Q9C009 403 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ARHGAP39Q9C0H5 1083 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NMUR2Q9GZQ4 415 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CDH19Q9H159 772 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SNX25Q9H3E2 840 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ESRP2Q9H6T0 727 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 SLC6A20Q9NP91 592 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 DMRT3Q9NQL9 472 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CLEC5AQ9NY25 188 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NKIRAS1Q9NYS0 192 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 P2RX2Q9UBL9 471 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 STK17AQ9UEE5 414 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NR2E1Q9Y466 385 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 MRPS18BQ9Y676 258 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 CD163L1Q9NR16 1453 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PARP4Q9UKK3 1724 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 ARHGEF33A8MVX0 844 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TMEM229AB2RXF0 380 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ANHXE9PGG2 379 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 K7ERQ8 282 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 DNPH1O43598 174 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CNOT3O75175 753 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 SRSF10O75494 262 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 UPK1BO75841 260 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RECQL4O94761 1208 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PROCP04070 461 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CHRM2P08172 466 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ASNSP08243 561 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 FAM157CP0CG43 387 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 HSMCR30P0CW71 290 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TPBGLP0DKB5 382 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TMEM225BP0DP42 221 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PLS3P13797 630 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 GCSHP23434 173 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PSMA5P28066 241 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 HOXD3P31249 432 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 APOBEC3AP31941 199 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 CXCR3P49682 368 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 MRE11P49959 708 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 STX17P56962 302 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 INHBEP58166 350 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CSNK1G2P78368 415 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SLC34A1Q06495 639 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RAB32Q13637 225 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RUNX3Q13761 415 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SLC10A1Q14973 349 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CEBPEQ15744 281 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CEP85LQ5SZL2 805 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 MRNIPQ6NTE8 343 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RRAGAQ7L523 313 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 HDDC2Q7Z4H3 204 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 BCDIN3DQ7Z5W3 292 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 NRROSQ86YC3 692 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CMTM4Q8IZR5 234 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 KLHL36Q8N4N3 616 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 GCSAMQ8N6F7 178 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.21□□□□□ -2.22
CEP290-201ENST00000309041 CCDC150Q8NCX0 1101 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D16Q8TBP0 767 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RNF128Q8TEB7 428 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 APOBEC4Q8WW27 367 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 C9orf72Q96LT7 481 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PRAM1Q96QH2 718 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 YME1L1Q96TA2 773 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 REG4Q9BYZ8 158 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RIOX1Q9H6W3 641 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms