RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 BTN2A2Q8WVV5 523 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 ASB9Q96DX5 294 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 CHFRQ96EP1 664 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 PARVBQ9HBI1 364 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 TMCO1Q9UM00 188 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 PSMD13Q9UNM6 376 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 PLXNB3Q9ULL4 1909 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 ULK1O75385 1050 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 SEC22BO75396 215 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 RECQL5O94762 991 aaPredicted RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 MATN4O95460 622 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 HIST1H2AGP0C0S8 130 aaPredicted RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 MTHFD1P11586 935 aaKnown RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 HIST1H2ADP20671 130 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 ATP6V1B2P21281 511 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 SLC6A2P23975 617 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 GRIA3P42263 894 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 IL12RB1P42701 662 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 SOX9P48436 509 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 TMEM115Q12893 351 aaPredicted RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 PDE12Q6L8Q7 609 aaKnown RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 C8orf82Q6P1X6 216 aaPredicted RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 VITQ6UXI7 678 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 DPPA4Q7L190 304 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 RALGPS2Q86X27 583 aaPredicted RBP11.13□□□□□ -0.63
SCG2-201ENST00000305409 SPPL2CQ8IUH8 684 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 PLPP6Q8IY26 295 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 GLYATL1Q969I3 302 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 HIST1H2AHQ96KK5 128 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 PPM1MQ96MI6 270 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 HIST1H2AJQ99878 128 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 FAM83CQ9BQN1 747 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 H2AFJQ9BTM1 129 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 SLC12A9Q9BXP2 914 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 CCL27Q9Y4X3 112 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 V9GYQ6 96 aa11.13□□□□□ -0.63
SCG2-201ENST00000305409 BRWD1Q9NSI6 2320 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 A0A1W2PP18 115 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 CFAP99D6REC4 459 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 TXNDC9O14530 226 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 WNT9AO14904 365 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 NFATC1O95644 943 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 B3GALT4O96024 378 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 PDYNP01213 254 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 EPHX1P07099 455 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 RCAN2Q14206 197 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 SF1Q15637 639 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 IMPG1Q17R60 797 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 PPP2R2DQ66LE6 453 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 DNAJC14Q6Y2X3 702 aaPredicted RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 EFL1Q7Z2Z2 1120 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 AMIGO2Q86SJ2 522 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 TRAM1L1Q8N609 369 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 MED8Q96G25 268 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 LRGUKQ96M69 825 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 FAM129BQ96TA1 746 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 GPATCH1Q9BRR8 931 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 KLHL4Q9C0H6 718 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 OR2AG1Q9H205 316 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 DPP7Q9UHL4 492 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 HCN2Q9UL51 889 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 CXorf51AA0A1B0GTR3 108 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 ARHGEF33A8MVX0 844 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 MANBAO00462 879 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 NUAK1O60285 661 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 TPST1O60507 370 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 FCARP24071 287 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 PSMD8P48556 350 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 HNRNPA1L2Q32P51 320 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 SYTL3Q4VX76 610 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 SAMD4BQ5PRF9 694 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 RAET1GQ6H3X3 334 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 KIAA2013Q8IYS2 634 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 LRTOMTQ8WZ04 291 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 GFM2Q969S9 779 aaKnown RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 SLCO4A1Q96BD0 722 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 NRTNQ99748 197 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 C19orf43Q9BQ61 176 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 ZSCAN5AQ9BUG6 496 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 BRINP2Q9C0B6 783 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 SLC32A1Q9H598 525 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 RDH14Q9HBH5 336 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 SLC27A6Q9Y2P4 619 aa11.12□□□□□ -0.63
SCG2-201ENST00000305409 PCYT1BQ9Y5K3 369 aaPredicted RBP11.12□□□□□ -0.63
SCG2-201ENST00000305409 GOLGA4Q13439 2230 aaKnown RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 TSPAN11A1L157 253 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 CLDN9O95484 217 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ASLP04424 464 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 ZCCHC18P0CG32 403 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 CBSLP0DN79 551 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 C6P13671 934 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 TCF3P15923 654 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 CBSP35520 551 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 HALP42357 657 aa11.11□□□□□ -0.63
SCG2-201ENST00000305409 DDX39BQ13838 428 aaKnown RBP11.11□□□□□ -0.63
SCG2-201ENST00000305409 SELPLGQ14242 412 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms