RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 KCNJ11Q14654 390 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 MYBPC3Q14896 1274 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 GPR153Q6NV75 609 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 ZCCHC10Q8TBK6 192 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 C8orf48Q96LL4 319 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 CYP2S1Q96SQ9 504 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.22
PRKCB-201ENST00000303531 MAN2B2Q9Y2E5 1009 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 PEX16Q9Y5Y5 336 aa13.71□□□□□ -0.22
PRKCB-201ENST00000303531 SLIT2O94813 1529 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 TTC24A2A3L6 582 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 EOMESO95936 686 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 SLC35G6P0C7Q6 338 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 AKT2P31751 481 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 RYKP34925 604 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 CAP1Q01518 475 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 NDUFA9Q16795 377 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 SNX20Q7Z614 316 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 TWNKQ96RR1 684 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 KAT8Q9H7Z6 458 aaKnown RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF282Q9UDV7 671 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 NOS1APO75052 506 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 IFNA6P05013 189 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 GSDMCQ9BYG8 508 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ERVW-1Q9UQF0 538 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 FAM159BA6NKW6 160 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 SIX3O95343 332 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 TBX18O95935 607 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 PCSK2P16519 638 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 RPS6KA3P51812 740 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 HERC3Q15034 1050 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ATCAYQ86WG3 371 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 LCN9Q8WX39 176 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 NIPSNAP2O75323 286 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 RANBP3LQ86VV4 465 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 GPER1Q99527 375 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 GPN3Q9UHW5 284 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 TBX10O75333 385 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ALAS2P22557 587 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 NFKB2Q00653 900 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 RFTN1Q14699 578 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 CNPY1Q3B7I2 92 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 AHI1Q8N157 1196 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 OR52B2Q96RD2 323 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 CALML5Q9NZT1 146 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF99A8MXY4 864 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 TOR1BO14657 336 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 ZBTB48P10074 688 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-201ENST00000303531 PLA2G16P53816 162 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 RBBP4Q09028 425 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 MERTKQ12866 999 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 RAB2BQ8WUD1 216 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 SLC35G5Q96KT7 338 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 SP140LQ9H930 580 aa13.7□□□□□ -0.22
PRKCB-201ENST00000303531 A8MT66 165 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 PDPK1O15530 556 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 CSKP41240 450 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 HSF2Q03933 536 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 PUDPQ08623 228 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 NAPRTQ6XQN6 538 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 ASB9Q96DX5 294 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 RNF31Q96EP0 1072 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 FUBP3Q96I24 572 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 RPLP0P05388 317 aaKnown RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 CASP9P55211 416 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 RPS24P62847 133 aaKnown RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 KBTBD7Q8WVZ9 684 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 AKTIPQ9H8T0 292 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SAP18O00422 153 aaKnown RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SCAMP1O15126 338 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 FMO3P31513 532 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SMCO1Q147U7 214 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 TMEM110Q86TL2 294 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 GPX6P59796 221 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF347Q96SE7 839 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 TVP23BQ9NYZ1 205 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 PGLSO95336 258 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 TMEM209Q96SK2 561 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 MARCH7Q9H992 704 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 TMEM59LQ9UK28 342 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 FAM172BPA6NC97 362 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 ECI2O75521 394 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 S100GP29377 79 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SLC10A7Q0GE19 358 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SLC30A6Q6NXT4 461 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 DNAJB8Q8NHS0 232 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 LRRC58Q96CX6 371 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 AQP12BA6NM10 295 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms