RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 LMAN1LQ9HAT1 526 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SMIM30A4D0T7 59 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 AP2A2O94973 939 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 VARSP26640 1264 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 LRRC66Q68CR7 880 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 OR10A6Q8NH74 314 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 C19orf60Q96EN9 201 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SLC35G5Q96KT7 338 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ASB2Q96Q27 587 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 P2RY13Q9BPV8 354 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 GPR34Q9UPC5 381 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 PRR5-ARHGAP8B1AHC4 643 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SEC14L5O43304 696 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 FCGR1AP12314 374 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 CD247P20963 164 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 ARHGAP8P85298 464 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 POU5F1Q01860 360 aaKnown RBP7.67□□□□□ -1.18
SCN9A-201ENST00000303354 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 GCNT6Q5T4J0 391 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 STARD5Q9NSY2 213 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 HCFC1R1Q9NWW0 138 aa7.67□□□□□ -1.18
SCN9A-201ENST00000303354 SOX30O94993 753 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 SIX3O95343 332 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 F10P00742 488 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 MYOGP15173 224 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 GRK6P43250 576 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CDH12P55289 794 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 NRG3P56975 720 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 MSLNQ13421 630 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TSTD2Q5T7W7 516 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 LRRC55Q6ZSA7 311 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 BEND4Q6ZU67 534 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CLDN19Q8N6F1 224 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PIWIL2Q8TC59 973 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 HNRNPABQ99729 332 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 DHX33Q9H6R0 707 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TCAF1Q9Y4C2 921 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RGSL1A5PLK6 1076 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 C11orf98E9PRG8 122 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TRAFD1O14545 582 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 STK16O75716 305 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RSL1D1O76021 490 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RLN1P04808 185 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 EPCAMP16422 314 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 JUNDP17535 347 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 HSPA13P48723 471 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PRMT2P55345 433 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 DNASE1L3Q13609 305 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TCEAL6Q6IPX3 200 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ULK3Q6PHR2 472 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 SPOCK2Q92563 424 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RAD9AQ99638 391 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 MAP2P11137 1827 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 C5orf60A6NFR6 353 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 KRT36O76013 467 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RXRGP48443 463 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF280AP59817 542 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 DMPKQ09013 629 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 KRR1Q13601 381 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PRKD1Q15139 912 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 FBXL22Q6P050 247 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CMTR2Q8IYT2 770 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 KCNK4Q9NYG8 393 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 NUP50Q9UKX7 468 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 KCPQ6ZWJ8 1503 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 OPN1LWP04000 364 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CCNCP24863 283 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CXCR1P25024 350 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 MAPK14Q16539 360 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 DHDDSQ86SQ9 333 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 FAM47BQ8NA70 645 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ZNF570Q96NI8 536 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TBC1D17Q9HA65 648 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 SPAG4Q9NPE6 437 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PCDHB1Q9Y5F3 818 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TNFRSF11BO00300 401 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 DNM1LO00429 736 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 SCO2O43819 266 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PRKAR1AP10644 381 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CDK7P50613 346 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ZCCHC7Q8N3Z6 543 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RMND5BQ96G75 393 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 OR8D2Q9GZM6 311 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 LRRC4CQ9HCJ2 640 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TVP23BQ9NYZ1 205 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 LYNP07948 512 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 CCNHP51946 323 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TXNL4AP83876 142 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 TNK2Q07912 1038 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PDE12Q6L8Q7 609 aaKnown RBP7.66□□□□□ -1.18
SCN9A-201ENST00000303354 RPLP0P6Q8NHW5 317 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 ABHD5Q8WTS1 349 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 THEM6Q8WUY1 208 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 C9orf16Q9BUW7 83 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 KLHL31Q9H511 634 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 PNPLA8Q9NP80 782 aa7.66□□□□□ -1.18
SCN9A-201ENST00000303354 HRASLS2Q9NWW9 162 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms