RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 CHRNB3Q05901 458 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 CBX2Q14781 532 aaPredicted RBP16.51■□□□□ 0.23
VPS37C-201ENST00000301765 TSNQ15631 228 aaKnown RBP16.51■□□□□ 0.23
VPS37C-201ENST00000301765 VARS2Q5ST30 1063 aaKnown RBP16.51■□□□□ 0.23
VPS37C-201ENST00000301765 KANK2Q63ZY3 851 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 PRR23CQ6ZRP0 262 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 TMEM179BQ7Z7N9 219 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 ELMOD2Q8IZ81 293 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 BPIFB1Q8TDL5 484 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.51■□□□□ 0.235e-11■■■■■ 94.1
VPS37C-201ENST00000301765 PYCR2Q96C36 320 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 DCSTAMPQ9H295 470 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 TNKS2Q9H2K2 1166 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 COQ3Q9NZJ6 369 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 ZNF639Q9UID6 485 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 EIF3LQ9Y262 564 aaKnown RBP16.51■□□□□ 0.23
VPS37C-201ENST00000301765 CYP7B1O75881 506 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 MT-ND2P03891 347 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 CD36P16671 472 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 ATP4BP51164 291 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 ISL1P61371 349 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 MADCAM1Q13477 382 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 CLCA4Q14CN2 919 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 LAIR1Q6GTX8 287 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 PAQR3Q6TCH7 311 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 PGBD5Q8N414 524 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 NATD1Q8N6N6 113 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 LIMD1Q9UGP4 676 aa16.51■□□□□ 0.23
VPS37C-201ENST00000301765 SCN4AP35499 1836 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 FAM172BPA6NC97 362 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 EFCAB9A8MZ26 197 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 PRSS23O95084 383 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 CD6P30203 668 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 CDKN1CP49918 316 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 DGKQP52824 942 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 OR2B6P58173 313 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 GALNT1Q10472 559 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 PTPRRQ15256 657 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 SLC14A2Q15849 920 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 FAM171BQ6P995 826 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 MYEOVQ96EZ4 313 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 ZNF300Q96RE9 604 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 RIBC2Q9H4K1 309 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 SP140LQ9H930 580 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 MRM3Q9HC36 420 aaKnown RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 NT5C1B-RDH14C9J2C7 533 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 H0Y626 953 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 LDB2O43679 373 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 TRIM16O95361 564 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 CYBBP04839 570 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 PRKACBP22694 351 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 GGT5P36269 586 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 NRG1Q02297 640 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 YWHAHQ04917 246 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 MGAT3Q09327 533 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 C18orf21Q32NC0 220 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-201ENST00000301765 PIK3R6Q5UE93 754 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 IRAK1BP1Q5VVH5 260 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 SYVN1Q86TM6 617 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 AMBNQ9NP70 447 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 PCDHGA10Q9Y5H3 936 aa16.5■□□□□ 0.23
VPS37C-201ENST00000301765 A0A1W2PP18 115 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 SLC2A3P11169 496 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ODC1P11926 461 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 MYCLP1P12525 358 aaPredicted RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 CYBAP13498 195 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ZNF37AP17032 561 aaPredicted RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 PCSK1P29120 753 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 FKBP1BP68106 108 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 CDC20Q12834 499 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 CDK5R2Q13319 367 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 BEND5Q7L4P6 421 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 BPHLQ86WA6 291 aaPredicted RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 TMEM86AQ8N2M4 240 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 SVOPQ8N4V2 548 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ZNF540Q8NDQ6 660 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 IMP4Q96G21 291 aaKnown RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ATOH8Q96SQ7 321 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 TRMOQ9BU70 441 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 SLC25A51Q9H1U9 297 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 CSNK1G1Q9HCP0 422 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ERVK13-1Q9NX77 482 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 OPTCQ9UBM4 332 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ZNF236Q9UL36 1845 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 LOC105371267A0A1B0GV96 52 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 NPEPPSL1A6NEC2 478 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 CENPXA8MT69 81 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 ERVH48-1M5A8F1 160 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 SCAMP3O14828 347 aaKnown RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 KMOO15229 486 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 SCO2O43819 266 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 RECQL5O94762 991 aaPredicted RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 PFKLP17858 780 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 TRAF3Q13114 568 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 FAM98BQ52LJ0 330 aaKnown RBP16.49■□□□□ 0.23
VPS37C-201ENST00000301765 FAM20CQ8IXL6 584 aa16.49■□□□□ 0.23
VPS37C-201ENST00000301765 RIMKLAQ8IXN7 391 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms