RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 C13orf42A0A1B0GVH6 325 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 SLC25A52Q3SY17 297 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CPT1BQ92523 772 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 DGCR14Q96DF8 476 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 XKR8Q9H6D3 395 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 TRPV4Q9HBA0 871 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 MRPS17Q9Y2R5 130 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 MAP4K5Q9Y4K4 846 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 AK5Q9Y6K8 562 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 FBP2O00757 339 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 RYKP34925 604 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 RPIAP49247 311 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 SEPHS1P49903 392 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 FKBP1BP68106 108 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 ELF3P78545 371 aaPredicted RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 LAPTM5Q13571 262 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 ZBTB46Q86UZ6 589 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 HDAC10Q969S8 669 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CLCA3PQ9Y6N3 262 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 hCG_1807616A0A1W2PRN6 198 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CPED1A4D0V7 1026 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CHRNB4P30926 498 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 IFNL1Q8IU54 200 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 TRPM4Q8TD43 1214 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 GAB3Q8WWW8 586 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 BTN2A3PQ96KV6 586 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 HIPK3Q9H422 1215 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 HAO2Q9NYQ3 351 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 GSKIPQ9P0R6 139 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 PSMD10O75832 226 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 LINC00032P0C843 101 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 GRM5P41594 1212 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CCL23P55773 120 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 MRPL49Q13405 166 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 ZACNQ401N2 412 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 SLC29A4Q7RTT9 530 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CDT1Q9H211 546 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 TMPRSS4Q9NRS4 437 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CORO1CQ9ULV4 474 aaPredicted RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 TTC3P53804 2025 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 SLC30A4O14863 429 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 BRINP1O60477 761 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 PITPNAQ00169 270 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 AUHQ13825 339 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 GPR107Q5VW38 600 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 CHST9Q7L1S5 443 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 GALNT13Q8IUC8 556 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 RBMX2Q9Y388 322 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 A8MUI8 341 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 PDPK1O15530 556 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 RBM34P42696 430 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 ATAD3CQ5T2N8 411 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 FAM110BQ8TC76 370 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 ART4Q93070 314 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 RFKQ969G6 155 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 SCGB3A2Q96PL1 93 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 NDNQ99608 321 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 TREX2Q9BQ50 279 aaPredicted RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 IL25Q9H293 177 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 LHX5Q9H2C1 402 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 SP140LQ9H930 580 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 FARSAQ9Y285 508 aaKnown RBP11.89□□□□□ -0.51
PCF11-201ENST00000298281 BTRCQ9Y297 605 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 TRAF6Q9Y4K3 522 aa11.89□□□□□ -0.51
PCF11-201ENST00000298281 FAM234BA2RU67 622 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 TVP23AA6NH52 213 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 SSX4O60224 188 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 REM1O75628 298 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 MC4RP32245 332 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CDH15P55291 814 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 BEX3Q00994 111 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 HID1Q8IV36 788 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 TMEM156Q8N614 296 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CNTD1Q8N815 330 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 TMEM145Q8NBT3 493 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CPNE2Q96FN4 548 aaPredicted RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 SNX15Q9NRS6 342 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 LYARQ9NX58 379 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 AIPO00170 330 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 MPZL2O60487 215 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CCNCP24863 283 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 TPTEP56180 551 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 PRR5P85299 388 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 C2orf80Q0P641 193 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 KDELC1Q6UW63 502 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 ZER1Q7Z7L7 766 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 OXR1Q8N573 874 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 SNIP1Q8TAD8 396 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 HM13Q8TCT9 377 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 DCAKDQ8WVC6 231 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 S100PBPQ96BU1 408 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CLPTM1LQ96KA5 538 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 PSKH2Q96QS6 385 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 SSX3Q99909 188 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms