RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 HCN2Q9UL51 889 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 RUVBL1Q9Y265 456 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 BTBD3Q9Y2F9 522 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SQORQ9Y6N5 450 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 UBE2QL1A1L167 161 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FAM234BA2RU67 622 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SCDO00767 359 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 LDB2O43679 373 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 RGS20O76081 388 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 VNN1O95497 513 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FABP3P05413 133 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 NR2F6P10588 404 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 PRPS2P11908 318 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 CYP4B1P13584 511 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 JUPP14923 745 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 CCR10P46092 362 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SLBPQ14493 270 aaKnown RBP eCLIP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 MS4A13Q5J8X5 152 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FRRS1Q6ZNA5 592 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 C12orf40Q86WS4 652 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 CLVS1Q8IUQ0 354 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 OXR1Q8N573 874 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 UBASH3BQ8TF42 649 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FAM192AQ9GZU8 254 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 DSN1Q9H410 356 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 ELAC1Q9H777 363 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 MKKSQ9NPJ1 570 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 NKIRAS2Q9NYR9 191 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 EHD3Q9NZN3 535 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TAC3Q9UHF0 121 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 EGFL7Q9UHF1 273 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 HS3ST4Q9Y661 456 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 PSMD11O00231 422 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 GNB5O14775 395 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SNPHO15079 494 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TCEA3O75764 348 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SERPINA1P01009 418 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TNFRSF8P28908 595 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 BMPR1AP36894 532 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 GDI2P50395 445 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 PPP3R1P63098 170 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 ZNF846Q147U1 533 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SLC9B1Q4ZJI4 515 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FAM92BQ6ZTR7 304 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 DCBLD1Q8N8Z6 715 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SMARCD2Q92925 531 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 NPAS2Q99743 824 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 NTPCRQ9BSD7 190 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 EPB41L1Q9H4G0 881 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SPHK2Q9NRA0 654 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SSR3Q9UNL2 185 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 MYO5BQ9ULV0 1848 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 A0A087WXM4 84 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 DHRS12A0PJE2 317 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TTC24A2A3L6 582 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TAF4O00268 1085 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 AP5Z1O43299 807 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 ERI3O43414 337 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 B4GALT2O60909 372 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FAM155BO75949 473 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TGDSO95455 350 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 BPGMP07738 259 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 MNDAP41218 407 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 MAGEA11P43364 429 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 BDKRB1P46663 353 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TMED10P49755 219 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 DRG2P55039 364 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 PON2Q15165 354 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 TLR1Q15399 786 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 GK5Q6ZS86 529 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 NET1Q7Z628 596 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 HEATR4Q86WZ0 1026 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 C11orf65Q8NCR3 313 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 FATE1Q969F0 183 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 PNPLA2Q96AD5 504 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 NMD3Q96D46 503 aaKnown RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SMOC2Q9H3U7 446 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 PADI2Q9Y2J8 665 aa6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 SPIN1Q9Y657 262 aaPredicted RBP6.8□□□□□ -1.32
GAPVD1-202ENST00000297933 KCPQ6ZWJ8 1503 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 DUXAA6NLW8 204 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 CHST10O43529 356 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 DUX1O43812 170 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 PCDHGA12O60330 932 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 NRP2O60462 931 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 PGM3O95394 542 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 HLA-DQB2P05538 268 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 ACVRL1P37023 503 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 GRIA2P42262 883 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 CTSKP43235 329 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 LIMK2P53671 638 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 RALGPS1Q5JS13 557 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 KBTBD6Q86V97 674 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 OR13C4Q8NGS5 318 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 OR4C6Q8NH72 309 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 SLC44A1Q8WWI5 657 aa6.79□□□□□ -1.32
GAPVD1-202ENST00000297933 FOXJ1Q92949 421 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms