RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TUBB1Q9H4B7 451 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 NOL11Q9H8H0 719 aaKnown RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 ARL15Q9NXU5 204 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 GULP1Q9UBP9 304 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 GPR34Q9UPC5 381 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 ZFR2Q9UPR6 939 aaKnown RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 ST14Q9Y5Y6 855 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 OR7A17O14581 309 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 NARSO43776 548 aaKnown RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 UROSP10746 265 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 CYP2A7P20853 494 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 AP1S2P56377 157 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 CCDC85BQ15834 202 aaPredicted RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 FBXO43Q4G163 708 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 MBOAT1Q6ZNC8 495 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 RINLQ6ZS11 566 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 OR52B6Q8NGF0 335 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 SKA2Q8WVK7 121 aaPredicted RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 LENG8Q96PV6 779 aaPredicted RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 MIPEPQ99797 713 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 TBC1D10AQ9BXI6 508 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 C1QTNF2Q9BXJ5 285 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 SLC6A17Q9H1V8 727 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 TAS2R1Q9NYW7 299 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 LRRC42Q9Y546 428 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 C17orf113A0A1B0GUU1 675 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 PIP5K1BO14986 540 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 PSIP1O75475 530 aaKnown RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 KRT16P08779 473 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 HIST1H2AGP0C0S8 130 aaPredicted RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 ZNF8P17098 575 aaPredicted RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 HIST1H2ADP20671 130 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 MAPK9P45984 424 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 RPS21P63220 83 aaKnown RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 TRAF3Q13114 568 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 FGL2Q14314 439 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 SMAD2Q15796 467 aaKnown RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 TMEM259Q4ZIN3 620 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 CMPK2Q5EBM0 449 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 KIAA1161Q6NSJ0 714 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 HEATR4Q86WZ0 1026 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 ZNF547Q8IVP9 402 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 CHCHD4Q8N4Q1 142 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 GANCQ8TET4 914 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 UTP4Q969X6 686 aaKnown RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 CMTM5Q96DZ9 223 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 LRCH3Q96II8 777 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 HIST1H2AHQ96KK5 128 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 C3orf30Q96M34 536 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 CATSPER2Q96P56 530 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 HIST1H2AJQ99878 128 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 H2AFJQ9BTM1 129 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 SLC2A4RGQ9NR83 387 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 OPTCQ9UBM4 332 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 ZFC3H1O60293 1989 aaKnown RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 DOCK9Q9BZ29 2069 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 K7EPI3 171 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 GIPC1O14908 333 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 STK16O75716 305 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 OR4F21O95013 312 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 OTCP00480 354 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 PCCBP05166 539 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 CPA2P48052 419 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 PREPP48147 710 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 HNMTP50135 292 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 CDK3Q00526 305 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 XKR5Q6UX68 686 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 ARMCX6Q7L4S7 300 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 TRAPPC5Q8IUR0 188 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 LILRA3Q8N6C8 439 aaPredicted RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 TP53I13Q8NBR0 393 aaPredicted RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 MCOLN3Q8TDD5 553 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 TEX101Q9BY14 249 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 IPPKQ9H8X2 491 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 MRGBPQ9NV56 204 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 FZD4Q9ULV1 537 aa15.19■□□□□ 0.02
LSM6-201ENST00000296581 COPG1Q9Y678 874 aaKnown RBP15.19■□□□□ 0.02
LSM6-201ENST00000296581 B2RBV5 119 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 CCNT2O60583 730 aaKnown RBP15.18■□□□□ 0.02
LSM6-201ENST00000296581 CRCPO75575 148 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 PIK3R1P27986 724 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 GDF5P43026 501 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 ADPRHP54922 357 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 CCINQ13939 588 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 ZXDCQ2QGD7 858 aaPredicted RBP15.18■□□□□ 0.02
LSM6-201ENST00000296581 RNF220Q5VTB9 566 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 LETMD1Q6P1Q0 360 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 TMEM154Q6P9G4 183 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 USP30Q70CQ3 517 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 OR14C36Q8NHC7 312 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 TRAPPC9Q96Q05 1148 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 OCEL1Q9H607 264 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 MBNL1Q9NR56 388 aaKnown RBP15.18■□□□□ 0.02
LSM6-201ENST00000296581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.18■□□□□ 0.02
LSM6-201ENST00000296581 FAM8A1Q9UBU6 413 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 TIMM22Q9Y584 194 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 GYG2O15488 501 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 SRFP11831 508 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms