RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 LRRC3BQ96PB8 259 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 COPS8Q99627 209 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 P2RY13Q9BPV8 354 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 HTATIP2Q9BUP3 242 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 SEZ6LQ9BYH1 1024 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 ZDHHC4Q9NPG8 344 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 MRGBPQ9NV56 204 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 SLC25A37Q9NYZ2 338 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 ZIM2Q9NZV7 527 aa11.53□□□□□ -0.56
RHO-201ENST00000296271 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 K7EPI3 171 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 PER2O15055 1255 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 PDYNP01213 254 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 PABPC4LP0CB38 370 aaKnown RBP11.52□□□□□ -0.56
RHO-201ENST00000296271 PSMA4P25789 261 aaKnown RBP11.52□□□□□ -0.56
RHO-201ENST00000296271 AKT1P31749 480 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 NKG7Q16617 165 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 CCSMST1Q4G0I0 132 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 CARD16Q5EG05 197 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 UBE2R2Q712K3 238 aaPredicted RBP11.52□□□□□ -0.56
RHO-201ENST00000296271 CARM1Q86X55 608 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 RNF145Q96MT1 663 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 TRIM54Q9BYV2 358 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 ACPTQ9BZG2 426 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 Q9H521 79 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 HS3ST2Q9Y278 367 aa11.52□□□□□ -0.56
RHO-201ENST00000296271 TNPO3Q9Y5L0 923 aaKnown RBP11.52□□□□□ -0.56
RHO-201ENST00000296271 RNF103-CHMP3A0A140T963 221 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 CCDC160A6NGH7 325 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 AGAP14A8MT82 685 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 MANBAO00462 879 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 ULK1O75385 1050 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 LEFTY1O75610 366 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 STK16O75716 305 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 STAMBPO95630 424 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 TIMP1P01033 207 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 FESP07332 822 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 CTSLP07711 333 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 PABPC1P11940 636 aaKnown RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 BMP2P12643 396 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 EFNA1P20827 205 aaPredicted RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 CCT8P50990 548 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 LAPTM5Q13571 262 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 ARSIQ5FYB1 569 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 GLYATQ6IB77 296 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 TMEM214Q6NUQ4 689 aaKnown RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 SFTPA1Q8IWL2 248 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 ANKFN1Q8N957 763 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 OR10A6Q8NH74 314 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 ZFP28Q8NHY6 868 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 ULK4Q96C45 1275 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 CGREF1Q99674 301 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 HPS4Q9NQG7 708 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 ZDHHC3Q9NYG2 299 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 SLC22A14Q9Y267 594 aa11.52□□□□□ -0.57
RHO-201ENST00000296271 HEMK1Q9Y5R4 338 aaPredicted RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 ZNF106Q9H2Y7 1883 aaKnown RBP11.52□□□□□ -0.57
RHO-201ENST00000296271 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 AQP12BA6NM10 295 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 H3BSA7 217 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 PLK4O00444 970 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 ARHGEF15O94989 841 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 TCF3P15923 654 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 EPCAMP16422 314 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 NSG1P42857 185 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 SPINT3P49223 89 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 PTCHD3Q3KNS1 767 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 OTUD3Q5T2D3 398 aaPredicted RBP11.51□□□□□ -0.57
RHO-201ENST00000296271 PPP4R4Q6NUP7 873 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 PRMT9Q6P2P2 845 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 SLC30A9Q6PML9 568 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 ENPP6Q6UWR7 440 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 USP45Q70EL2 814 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 HID1Q8IV36 788 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 AQP12AQ8IXF9 295 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 HS3ST5Q8IZT8 346 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 TRPV3Q8NET8 790 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 VPS50Q96JG6 964 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 ZNF583Q96ND8 569 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 TSSK3Q96PN8 268 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 EFHD1Q9BUP0 239 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 FAM192AQ9GZU8 254 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 ACTR8Q9H981 624 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 FADS2P1A8MWK0 482 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 SGTAO43765 313 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 TNFAIP8O95379 198 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 EPB42P16452 691 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 IL10P22301 178 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 FASP25445 335 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 NFKBIAP25963 317 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 CSNK1DP48730 415 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 RPL26P61254 145 aaKnown RBP11.51□□□□□ -0.57
RHO-201ENST00000296271 BNIP2Q12982 314 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 INPP5AQ14642 412 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 IMPG1Q17R60 797 aa11.51□□□□□ -0.57
RHO-201ENST00000296271 ZIK1Q3SY52 487 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms