RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TELO2Q9Y4R8 837 aa17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
CDC42EP3-201ENST00000295324 A0A0D9SEW6 157 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ADSLP30566 484 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 DUSP3P51452 185 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 NFATC2Q13469 925 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 NEDD8Q15843 81 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 DDX1Q92499 740 aaKnown RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 TSGA13Q96PP4 275 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 NDC1Q9BTX1 674 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 EBPLQ9BY08 206 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 LRMDAQ9H2I8 198 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 KCNK6Q9Y257 313 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 GSRP00390 522 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ACTR3P61158 418 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ELAVL3Q14576 367 aaKnown RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 DHCR24Q15392 516 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 LRRC70Q7Z2Q7 622 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 DEFB119Q8N690 84 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 CNTD1Q8N815 330 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 SUN3Q8TAQ9 357 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 JSRP1Q96MG2 331 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 MUC13Q9H3R2 512 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZDHHC7Q9NXF8 308 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ALS2Q96Q42 1657 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 PIP5K1BO14986 540 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 NPC1O15118 1278 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 TSPAN6O43657 245 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 MGRN1O60291 552 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 LEFTY1O75610 366 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 GRIA1P42261 906 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 YTHDF3Q7Z739 585 aaKnown RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 UMODL1-AS1Q8N2C9 162 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 CADM2Q8N3J6 435 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 FAM98AQ8NCA5 519 aaKnown RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZMIZ2Q8NF64 920 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 BORCS6Q96GS4 357 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ALKBH4Q9NXW9 302 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 CYP8B1Q9UNU6 501 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ELOVL7A1L3X0 281 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 CENPXA8MT69 81 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 DNAJA2O60884 412 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 STC2O76061 302 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 GLYATQ6IB77 296 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 HEATR4Q86WZ0 1026 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF671Q8TAW3 534 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 HM13Q8TCT9 377 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 SLC32A1Q9H598 525 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 CNOT6Q9ULM6 557 aaKnown RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 SOCS7O14512 581 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 CCKBRP32239 447 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 GPRC6AQ5T6X5 926 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 MYDGFQ969H8 173 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 PSKH2Q96QS6 385 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF184Q99676 751 aaPredicted RBP17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 KCNN2Q9H2S1 579 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 POLE3Q9NRF9 147 aa17.38■□□□□ 0.37
CDC42EP3-201ENST00000295324 LINC00854A0A1B0GVQ3 168 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 AP2A2O94973 939 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 CASRP41180 1078 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF852Q6ZMS4 543 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF730Q6ZMV8 503 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 COX18Q8N8Q8 333 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 NFKBIL1Q9UBC1 381 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 A0A0J9YVX5 310 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 C2orf78A6NCI8 922 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 MPIP34949 423 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ELOCQ15369 112 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZBTB6Q15916 424 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 Q6ZVL8 140 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 TCEAL8Q8IYN2 117 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 RGMAQ96B86 450 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 MKL2Q9ULH7 1088 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ERGIC3Q9Y282 383 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 CLCA3PQ9Y6N3 262 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 PFKLP17858 780 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 PROZP22891 400 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 PGDP52209 483 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 TRIM25Q14258 630 aaKnown RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 PRKD1Q15139 912 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZIK1Q3SY52 487 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 NAPRTQ6XQN6 538 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 CACTIN-AS1Q8N1I8 211 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 NATD1Q8N6N6 113 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF784Q8NCA9 323 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 PYCR2Q96C36 320 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZFRQ96KR1 1074 aaKnown RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 ZNF446Q9NWS9 450 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 PAPSS2O95340 614 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 IFNW1P05000 195 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 SRPRAP08240 638 aaKnown RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 SAGP10523 405 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 WDR5P61964 334 aaKnown RBP17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 TMEM59LQ9UK28 342 aa17.37■□□□□ 0.37
CDC42EP3-201ENST00000295324 M0QZQ0 153 aa17.36■□□□□ 0.37
CDC42EP3-201ENST00000295324 XKRYO14609 159 aa17.36■□□□□ 0.37
CDC42EP3-201ENST00000295324 PGLSO95336 258 aa17.36■□□□□ 0.37
CDC42EP3-201ENST00000295324 CCNA2P20248 432 aa17.36■□□□□ 0.37
CDC42EP3-201ENST00000295324 HERVK_113P63132 956 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms