RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RGS19P49795 217 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 SWT1Q5T5J6 900 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 MSANTD2Q6P1R3 559 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 MED27Q6P2C8 311 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 BRD7Q9NPI1 651 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 SALL4Q9UJQ4 1053 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 IL12BP29460 328 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 S100A10P60903 97 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 CAND1Q86VP6 1230 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 SLC9A9Q8IVB4 645 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 OR10Q1Q8NGQ4 319 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 MAFIPQ8WZ33 124 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 CENPNQ96H22 339 aaPredicted RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TTTY10Q9BZA0 68 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 NUDT4Q9NZJ9 180 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TSPAN1O60635 241 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 C1RP00736 705 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 ATXN7L2Q5T6C5 722 aaPredicted RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 SH3PXD2AQ5TCZ1 1133 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TCEAL6Q6IPX3 200 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 SERPINA9Q86WD7 417 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 MOV10Q9HCE1 1003 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 NOL4O94818 638 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 RPLP2P05387 115 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 ACTR3P61158 418 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TIGD6Q17RP2 521 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TEX44Q53QW1 395 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 CRTC1Q6UUV9 634 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 USP50Q70EL3 339 aaPredicted RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 AMBNQ9NP70 447 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 RNASEH2AO75792 299 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 LAMP2P13473 410 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 RNF144AP50876 292 aaPredicted RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 PLD5Q8N7P1 536 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 PCDH19Q8TAB3 1148 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 CLEC4CQ8WTT0 213 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TRIM2Q9C040 744 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 METTL8Q9H825 291 aaKnown RBP15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TCAF1Q9Y4C2 921 aa15.88■□□□□ 0.13
SSRP1-202ENST00000293880 TEX46H3BTG2 121 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 DNAJA2O60884 412 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 GCATO75600 419 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 MAT2AP31153 395 aaKnown RBP15.87■□□□□ 0.13
SSRP1-202ENST00000293880 FNTBP49356 437 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 CLCN2P51788 898 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 DEFB115Q30KQ5 88 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 ZCCHC12Q6PEW1 402 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 DCLRE1AQ6PJP8 1040 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 GPR142Q7Z601 462 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 RIOX2Q8IUF8 465 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 OR6K6Q8NGW6 343 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 MSANTD3Q96H12 275 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 SIRPGQ9P1W8 387 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 CYP3A7-CYP3A51PA0A087WV96 503 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 FXYD6-FXYD2A0A087WZ82 144 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 LRRC10BA6NIK2 292 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 CYP3A7P24462 503 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 CDKN2BP42772 138 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 MINDY4Q4G0A6 757 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 AMIGO1Q86WK6 493 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 PDPRQ8NCN5 879 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF548Q8NEK5 533 aaPredicted RBP15.87■□□□□ 0.13
SSRP1-202ENST00000293880 C7orf26Q96N11 449 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 TTYH2Q9BSA4 534 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 TRMT61BQ9BVS5 477 aaKnown RBP15.87■□□□□ 0.13
SSRP1-202ENST00000293880 FXYD6Q9H0Q3 95 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 OR1D2P34982 312 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 PRKCDQ05655 676 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 CD300LFQ8TDQ1 290 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 TCF7L1Q9HCS4 588 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 PADI2Q9Y2J8 665 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 ALG5Q9Y673 324 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 COL5A2P05997 1499 aaPredicted RBP15.87■□□□□ 0.13
SSRP1-202ENST00000293880 TPSB2P20231 275 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 MAPK8P45983 427 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 TPSAB1Q15661 275 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 KLHL26Q53HC5 615 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 POTEHQ6S545 545 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 CMTR2Q8IYT2 770 aaKnown RBP15.87■□□□□ 0.13
SSRP1-202ENST00000293880 SLC25A36Q96CQ1 311 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 RDH8Q9NYR8 311 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 ZNF639Q9UID6 485 aa15.87■□□□□ 0.13
SSRP1-202ENST00000293880 OR51F1A6NGY5 319 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 TTC34A8MYJ7 566 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 PLSCR1O15162 318 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 FAM174BQ3ZCQ3 159 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 ADNP2Q6IQ32 1131 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 LRRC69Q6ZNQ3 347 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CPNE9Q8IYJ1 553 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 OR14C36Q8NHC7 312 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 SLC9A3R1O14745 358 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 RPP14O95059 124 aaKnown RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 AP3S2P59780 193 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CHIT1Q13231 466 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 CES5AQ6NT32 575 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 NRSN1Q8IZ57 195 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 C12orf43Q96C57 262 aaKnown RBP15.86■□□□□ 0.13
SSRP1-202ENST00000293880 FKBPLQ9UIM3 349 aa15.86■□□□□ 0.13
SSRP1-202ENST00000293880 TRAFD1O14545 582 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms