RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PCDH8O95206 1070 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 OR5F1O95221 314 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 FABP3P05413 133 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF24P17028 368 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 OGNP20774 298 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 GBE1Q04446 702 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNHIT3Q15649 155 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 RUNDC3AQ59EK9 446 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 CPTPQ5TA50 214 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ANKRD22Q5VYY1 191 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ANO7Q6IWH7 933 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 GRASPQ7Z6J2 395 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 PPCDCQ96CD2 204 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 HAVCR1Q96D42 359 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 TSSK3Q96PN8 268 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF317Q96PQ6 595 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ATP13A3Q9H7F0 1226 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 RAB23Q9ULC3 237 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 FOXO6A8MYZ6 492 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 STX16-NPEPL1H3BU86 382 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 STX16O14662 325 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ADAMDEC1O15204 470 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC22A1O15245 554 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 VNN1O95497 513 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 PKMP14618 531 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 PTX3P26022 381 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ASMTP46597 345 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 GRM3Q14832 879 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 SUZ12Q15022 739 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ACAP2Q15057 778 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 EML3Q32P44 896 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 GPAT3Q53EU6 434 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 PPM1JQ5JR12 505 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 RALGPS2Q86X27 583 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 CPXM1Q96SM3 734 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 COPS8Q99627 209 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 TRPV5Q9NQA5 729 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 EXD2Q9NVH0 621 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF224Q9NZL3 707 aa11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 SUCOQ9UBS9 1254 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-201ENST00000293748 AP2A2O94973 939 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 POLR2EP19388 210 aaKnown RBP11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 CARTPTQ16568 116 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 NADK2Q4G0N4 442 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 DEF8Q6ZN54 512 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 DNAJB7Q7Z6W7 309 aaPredicted RBP11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 XYLT1Q86Y38 959 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 CRYBG2Q8N1P7 616 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 ZNF655Q8N720 491 aaPredicted RBP11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 GPR156Q8NFN8 814 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 SLCO2A1Q92959 643 aa11.65□□□□□ -0.55
SYNGAP1-201ENST00000293748 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 FADS2P1A8MWK0 482 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 B4GALT3O60512 393 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 UGT2B17O75795 530 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 LRATO95237 230 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 METTL18O95568 372 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 IFNGP01579 166 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 C9P02748 559 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 CCR4P51679 360 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 NXPE3Q969Y0 559 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 C8orf48Q96LL4 319 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 MNTQ99583 582 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 DUSP16Q9BY84 665 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 NKIRAS2Q9NYR9 191 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 PCDHB1Q9Y5F3 818 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 ZNF99A8MXY4 864 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 TNFRSF11BO00300 401 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 KPNA3O00505 521 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 REM1O75628 298 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 NUDT14O95848 222 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 MERTKQ12866 999 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 SGCGQ13326 291 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 KCTD19Q17RG1 926 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 OLFML2AQ68BL7 652 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 KLHL24Q6TFL4 600 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 SPRED2Q7Z698 418 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 TAF8Q7Z7C8 310 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 DQX1Q8TE96 717 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 PCED1BQ96HM7 432 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 DNAJC1Q96KC8 554 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 AGAP2Q99490 1192 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 HNRNPABQ99729 332 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 C1QTNF1Q9BXJ1 281 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 ABCB9Q9NP78 766 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 TRPS1Q9UHF7 1281 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 CNTN6Q9UQ52 1028 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 MYBPHLA2RUH7 354 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 FAM86C2PA6NEL3 165 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 RPP40O75818 363 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 PRKD3O94806 890 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 RPLP0P05388 317 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 PGRP06401 933 aa11.64□□□□□ -0.55
SYNGAP1-201ENST00000293748 DNAJB1P25685 340 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms