RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ANKS6Q68DC2 871 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 TBC1D21Q8IYX1 336 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 UNC5BQ8IZJ1 945 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 BMPERQ8N8U9 685 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 BBOF1Q8ND07 529 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CFAP61Q8NHU2 1237 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 SKA2Q8WVK7 121 aaPredicted RBP24.44■■□□□ 1.5
PDF-201ENST00000288022 PMEPA1Q969W9 287 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 FAM136AQ96C01 138 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CFAP36Q96G28 342 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CTRCQ99895 268 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 DDA1Q9BW61 102 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 DPH1Q9BZG8 443 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 B3GNT4Q9C0J1 378 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CCDC68Q9H2F9 335 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 XKR8Q9H6D3 395 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 IARS2Q9NSE4 1012 aaKnown RBP24.44■■□□□ 1.5
PDF-201ENST00000288022 POLG2Q9UHN1 485 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CHMP2BQ9UQN3 213 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 B3GALT1Q9Y5Z6 326 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 E5RI56 91 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 PKMP14618 531 aaKnown RBP24.43■■□□□ 1.5
PDF-201ENST00000288022 ARL4DP49703 201 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 ADARP55265 1226 aaKnown RBP24.43■■□□□ 1.5
PDF-201ENST00000288022 FOXM1Q08050 763 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 CALCOCO2Q13137 446 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 BROXQ5VW32 411 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 AMIGO1Q86WK6 493 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 ZFAND4Q86XD8 727 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 IGDCC3Q8IVU1 814 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 OR5K2Q8NHB8 316 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 GABPB2Q8TAK5 448 aaPredicted RBP24.43■■□□□ 1.5
PDF-201ENST00000288022 UBXN4Q92575 508 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 CD180Q99467 661 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 NRTNQ99748 197 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 MAP3K3Q99759 626 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 ERP44Q9BS26 406 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 ASPSCR1Q9BZE9 553 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 ZC3H7BQ9UGR2 993 aaKnown RBP24.43■■□□□ 1.5
PDF-201ENST00000288022 FBXO5Q9UKT4 447 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 PCDHGA3Q9Y5H0 932 aa24.43■■□□□ 1.5
PDF-201ENST00000288022 URB1O60287 2271 aaKnown RBP24.42■■□□□ 1.5
PDF-201ENST00000288022 DMXL2Q8TDJ6 3036 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 TLCD2A6NGC4 264 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 KDM1AO60341 852 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 SLCO2B1O94956 709 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 ERVK-10P10266 1014 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 COL28A1Q2UY09 1125 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 PLEKHS1Q5SXH7 462 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 KLHL6Q8WZ60 621 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 FBXO8Q9NRD0 319 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 TSR3Q9UJK0 312 aaKnown RBP24.42■■□□□ 1.5
PDF-201ENST00000288022 CDC23Q9UJX2 597 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 ACSL6Q9UKU0 697 aa24.42■■□□□ 1.5
PDF-201ENST00000288022 IGHV5-51A0A0C4DH38 117 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 MATN2O00339 956 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 BTN3A3O00478 584 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 BTN3A1O00481 513 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 RPN2P04844 631 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 CD82P27701 267 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 SHMT2P34897 504 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 KPNA2P52292 529 aaKnown RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 MPP1Q00013 466 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 TLE3Q04726 772 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 PDIA2Q13087 525 aaKnown RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 CEACAM20Q6UY09 585 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 ANKMY2Q8IV38 441 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 LRRC39Q96DD0 335 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 TEFMQ96QE5 360 aaKnown RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 APMAPQ9HDC9 416 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 PPANQ9NQ55 473 aaKnown RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 SIDT1Q9NXL6 827 aaKnown RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 PLAGL1Q9UM63 463 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 ICKQ9UPZ9 632 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 UTP11Q9Y3A2 253 aaKnown RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 PCDHB11Q9Y5F2 797 aa24.41■■□□□ 1.5
PDF-201ENST00000288022 KMT2BQ9UMN6 2715 aaPredicted RBP24.41■■□□□ 1.5
PDF-201ENST00000288022 POLR1CO15160 346 aaPredicted RBP24.4■■□□□ 1.5
PDF-201ENST00000288022 LIPCP11150 499 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 NELFEP18615 380 aaKnown RBP24.4■■□□□ 1.5
PDF-201ENST00000288022 CDH3P22223 829 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 SH3BP2P78314 561 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 CLN3Q13286 438 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 UNC5DQ6UXZ4 953 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 UNC5AQ6ZN44 842 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 ZNF572Q7Z3I7 529 aaPredicted RBP24.4■■□□□ 1.5
PDF-201ENST00000288022 SIDT2Q8NBJ9 832 aaKnown RBP24.4■■□□□ 1.5
PDF-201ENST00000288022 CERS2Q96G23 380 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 OR6C1Q96RD1 312 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 WHRNQ9P202 907 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 POMT2Q9UKY4 750 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 TEX264Q9Y6I9 313 aa24.4■■□□□ 1.5
PDF-201ENST00000288022 C2orf74A8MZ97 194 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 STMND1H3BQB6 276 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 TP73O15350 636 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 TGIF1Q15583 401 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 KMT5CQ86Y97 462 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 ZBTB2Q8N680 514 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 FOPNLQ96NB1 174 aa24.39■■□□□ 1.49
PDF-201ENST00000288022 RAB17Q9H0T7 212 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms