RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CAMKVQ8NCB2 501 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 EEF1AKMT1Q8WVE0 214 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 SNRNP27Q8WVK2 155 aaKnown RBP18.2■□□□□ 0.5
PCDH1-201ENST00000287008 ARHGEF3Q9NR81 526 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 IKZF2Q9UKS7 526 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 CLCA3PQ9Y6N3 262 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 A0A0J9YVX5 310 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 PRKCHP24723 683 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 STAT5AP42229 794 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 PTDSS1P48651 473 aaKnown RBP18.2■□□□□ 0.5
PCDH1-201ENST00000287008 RING1Q06587 406 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 MAPK11Q15759 364 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 PGAM4Q8N0Y7 254 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 CLDN19Q8N6F1 224 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 TSPAN14Q8NG11 270 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 DCAKDQ8WVC6 231 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 PIH1D2Q8WWB5 315 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 KLHDC7BQ96G42 594 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 SLC35G5Q96KT7 338 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 B4GALT6Q9UBX8 382 aa18.2■□□□□ 0.5
PCDH1-201ENST00000287008 PCDH7O60245 1069 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 IL7RP16871 459 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 KCNA5P22460 613 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 CYP4F3Q08477 520 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 RIT1Q92963 219 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 RAPGEFL1Q9UHV5 662 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 DUOX1Q9NRD9 1551 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 TIPRLO75663 272 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 CYP4B1P13584 511 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 CSNK2A2P19784 350 aaPredicted RBP18.19■□□□□ 0.5
PCDH1-201ENST00000287008 MYL9P24844 172 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 CHN2P52757 468 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 OGDHQ02218 1023 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 SUZ12Q15022 739 aaKnown RBP18.19■□□□□ 0.5
PCDH1-201ENST00000287008 PTGES3Q15185 160 aaKnown RBP18.19■□□□□ 0.5
PCDH1-201ENST00000287008 RANBP3LQ86VV4 465 aaPredicted RBP18.19■□□□□ 0.5
PCDH1-201ENST00000287008 ADAMTS10Q9H324 1103 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 KCNK6Q9Y257 313 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 KMOO15229 486 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 GMFGO60234 142 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 FECHP22830 423 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 MPIP34949 423 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 DCST1Q5T197 706 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 KBTBD6Q86V97 674 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 SPPL2CQ8IUH8 684 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 GPR151Q8TDV0 419 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 LPGAT1Q92604 370 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 DUSP26Q9BV47 211 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 SPHK2Q9NRA0 654 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 TEX28O15482 410 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 HCN1O60741 890 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 TMCC2O75069 709 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 SCELO95171 688 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 CYBAP13498 195 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 PHF19Q5T6S3 580 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 JAZF1Q86VZ6 243 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 OR2T34Q8NGX1 318 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 OR2T3Q8NH03 318 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 SLC13A3Q8WWT9 602 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 XYLT2Q9H1B5 865 aa18.19■□□□□ 0.5
PCDH1-201ENST00000287008 C2orf71A6NGG8 1288 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 EPOP01588 193 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 EFNA1P20827 205 aaPredicted RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 HOXD13P35453 343 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SLC25A11Q02978 314 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SLC9A4Q6AI14 798 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 RBM15BQ8NDT2 890 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 KBTBD8Q8NFY9 601 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 KXD1Q9BQD3 176 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 EPB41L1Q9H4G0 881 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SNX7Q9UNH6 387 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 FADS2P1A8MWK0 482 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 H7C0S8 307 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 ADH1BP00325 375 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 RPL10P27635 214 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 Q6ZVL8 140 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SMG8Q8ND04 991 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 KCNS3Q9BQ31 491 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 KLHL25Q9H0H3 589 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SLC32A1Q9H598 525 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SPEF2Q9C093 1822 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 IRGMA1A4Y4 181 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 GJB5O95377 273 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 KLK3P07288 261 aaPredicted RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SNAPC1Q16533 368 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 KCT2Q8NC54 265 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 SETD7Q8WTS6 366 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 ALG2Q9H553 416 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 HMG20AQ9NP66 347 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 VPS29Q9UBQ0 182 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 PCDHB11Q9Y5F2 797 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 CFAP20Q9Y6A4 193 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 MYADML2A6NDP7 307 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 DUXAA6NLW8 204 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 FOXO6A8MYZ6 492 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 TNFRSF11BO00300 401 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 ERI3O43414 337 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 REM1O75628 298 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms