RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 EEDO75530 441 aaKnown RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 FSHRP23945 695 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 HTR1EP28566 365 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 PIGAP37287 484 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 MS4A13Q5J8X5 152 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 GATAD2AQ86YP4 633 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 SCML4Q8N228 414 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 SVOPQ8N4V2 548 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 OR52J3Q8NH60 311 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF599Q96NL3 588 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 RMND5AQ9H871 391 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 REEP1Q9H902 201 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 MAGEE1Q9HCI5 957 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 GIT1Q9Y2X7 761 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ARID2Q68CP9 1835 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ACOX3O15254 700 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 LDB2O43679 373 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 DEFA1P59665 94 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 DEFA3P59666 94 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 PWP1Q13610 501 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 DSG4Q86SJ6 1040 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ADGRE3Q9BY15 652 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 FBXO44Q9H4M3 255 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 CPQQ9Y646 472 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 KNL1Q8NG31 2342 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 RFXANKO14593 260 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 TFECO14948 347 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 MATN4O95460 622 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 NUDT6P53370 316 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ERVPABLB-1P60509 514 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 RPS24P62847 133 aaKnown RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 UBE3AQ05086 875 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 NECAB2Q7Z6G3 386 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 SLC44A2Q8IWA5 706 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 OR2T11Q8NH01 316 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 PROKR1Q8TCW9 393 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 HDAC2Q92769 488 aaKnown RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 TUBA1CQ9BQE3 449 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 CIPCQ9C0C6 399 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ASB8Q9H765 288 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 LRTM1Q9HBL6 345 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ZIM2Q9NZV7 527 aa13.16□□□□□ -0.3
SCAF4-201ENST00000286835 ZFC3H1O60293 1989 aaKnown RBP13.16□□□□□ -0.3
SCAF4-201ENST00000286835 MYADML2A6NDP7 307 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 EFCAB9A8MZ26 197 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 FAM155AB1AL88 458 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ITGB1P05556 798 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 SLC10A3P09131 477 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HIST1H2AGP0C0S8 130 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HIST1H2ADP20671 130 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HRH2P25021 359 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 GNPDA1P46926 289 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 DGKEP52429 567 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 RAPSNQ13702 412 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ABRAXAS2Q15018 415 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 PSAPL1Q6NUJ1 521 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 LETMD1Q6P1Q0 360 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 C11orf74Q86VG3 221 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 CARNMT1Q8N4J0 409 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 PROX1Q92786 737 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HIST1H2AHQ96KK5 128 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HIST1H2AJQ99878 128 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 CHCHD6Q9BRQ6 235 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TSEN34Q9BSV6 310 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 H2AFJQ9BTM1 129 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 YIPF2Q9BWQ6 316 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 SMOC2Q9H3U7 446 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ARL15Q9NXU5 204 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 LCHNA4D1U4 455 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 LRG1P02750 347 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 CYP11A1P05108 521 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 FGF4P08620 206 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 GTF2E2P29084 291 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 IL12AP29459 219 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 RAB15P59190 212 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 RHOAP61586 193 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 EMX2Q04743 252 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 CES5AQ6NT32 575 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 DOK6Q6PKX4 331 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 SZRD1Q7Z422 152 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TTC29Q8NA56 475 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 CHPT1Q8WUD6 406 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 RPL3LQ92901 407 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms