RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 CD247P20963 164 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 HPCAL1P37235 193 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 CAMK2GQ13555 558 aaPredicted RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 FAM214AQ32MH5 1076 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 C18orf21Q32NC0 220 aaPredicted RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 INTS6LQ5JSJ4 861 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 SDE2Q6IQ49 451 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 PRR23CQ6ZRP0 262 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 HDDC2Q7Z4H3 204 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 FAM217AQ8IXS0 508 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 PPTC7Q8NI37 304 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 BRSK1Q8TDC3 778 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 NARS2Q96I59 477 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 TRNT1Q96Q11 434 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 OR6C70A6NIJ9 312 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 SAP18O00422 153 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 HAT1O14929 419 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 DCLK1O15075 740 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 MTX2O75431 263 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 CREG1O75629 220 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 SCELO95171 688 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 GBAP04062 536 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 PBX3P40426 434 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 GSTM5P46439 218 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ALDH7A1P49419 539 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 AIF1P55008 147 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 RPS14P62263 151 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 ZNF404Q494X3 552 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 RBM48Q5RL73 367 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 RETSATQ6NUM9 610 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 RTP4Q96DX8 246 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 AARSD1Q9BTE6 412 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 COQ3Q9NZJ6 369 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 APOL3O95236 402 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ALDH2P05091 517 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 PGRP06401 933 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 MMP3P08254 477 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 HTR6P50406 440 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ATP12AP54707 1039 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ALFQ53S48 1182 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ZNF648Q5T619 568 aaPredicted RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 TMEM126BQ8IUX1 230 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ANKFN1Q8N957 763 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 PAWRQ96IZ0 340 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 CLEC4MQ9H2X3 399 aaPredicted RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 OSGEPL1Q9H4B0 414 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 C1orf109Q9NX04 203 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 TMEM9Q9P0T7 183 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 GSAPA4D1B5 854 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 TSPAN9O75954 239 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ALPIP09923 528 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 SMPD1P17405 629 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 PSMA1P25786 263 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 OR1E2P47887 323 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 TXNL4AP83876 142 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 OR4D1Q15615 310 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 SMU1Q2TAY7 513 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 C16orf62Q7Z3J2 963 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 DTX3Q8N9I9 347 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 NDNFQ8TB73 568 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 TRUB1Q8WWH5 349 aaKnown RBP15.43■□□□□ 0.06
USP43-201ENST00000285199 CEP295NLQ96MC4 621 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 ZDHHC6Q9H6R6 413 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 LTB4R2Q9NPC1 389 aa15.43■□□□□ 0.06
USP43-201ENST00000285199 DNTTP04053 509 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 FUCA1P04066 466 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 LCKP06239 509 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 BMP2P12643 396 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 DDX5P17844 614 aaKnown RBP15.42■□□□□ 0.06
USP43-201ENST00000285199 MYF6P23409 242 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 GABRB3P28472 473 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 TUBB3Q13509 450 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 IL18Q14116 193 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 NHSL2Q5HYW2 709 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 ZUFSPQ96AP4 578 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 COPS8Q99627 209 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 TNKS2Q9H2K2 1166 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 AASDHPPTQ9NRN7 309 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 RHCGQ9UBD6 479 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 FCF1Q9Y324 198 aaKnown RBP15.42■□□□□ 0.06
USP43-201ENST00000285199 HS3ST4Q9Y661 456 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 A0A1W2PQ72 361 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 OR2AG2A6NM03 316 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 FFAR2O15552 330 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 USP2O75604 605 aaPredicted RBP15.42■□□□□ 0.06
USP43-201ENST00000285199 STBD1O95210 358 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 OR56A5P0C7T3 313 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 SLC15A1P46059 708 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 CLCN2P51788 898 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 LRP8Q14114 963 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 FBXL22Q6P050 247 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 CCBE1Q6UXH8 406 aaPredicted RBP15.42■□□□□ 0.06
USP43-201ENST00000285199 SYVN1Q86TM6 617 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 NTAN1Q96AB6 310 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 PAAF1Q9BRP4 392 aa15.42■□□□□ 0.06
USP43-201ENST00000285199 NEK6Q9HC98 313 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms