RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 C6orf10Q5SRN2 563 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 HENMT1Q5T8I9 393 aaKnown RBP17.54■□□□□ 0.4
CAPN1-201ENST00000279247 RAET1GQ6H3X3 334 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 TMEM220Q6QAJ8 160 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 CYP20A1Q6UW02 462 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 SPATA19Q7Z5L4 167 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 TRAPPC5Q8IUR0 188 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 ARRDC3Q96B67 414 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 KXD1Q9BQD3 176 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 KLHL4Q9C0H6 718 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 MRGBPQ9NV56 204 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 ASPDHA6ND91 283 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 FXYD1O00168 92 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 EPHX1P07099 455 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 ZCCHC18P0CG32 403 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 PDHA2P29803 388 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 MMP12P39900 470 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 HALP42357 657 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 BDKRB1P46663 353 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 SAMD4BQ5PRF9 694 aaKnown RBP17.54■□□□□ 0.4
CAPN1-201ENST00000279247 KIAA0907Q7Z7F0 614 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-201ENST00000279247 AMIGO2Q86SJ2 522 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 SPPL2CQ8IUH8 684 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 SLC15A3Q8IY34 581 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 LRCH1Q9Y2L9 728 aa17.54■□□□□ 0.4
CAPN1-201ENST00000279247 GON4LQ3T8J9 2241 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 IGLV3-16A0A075B6K0 115 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 RNASEH2AO75792 299 aaKnown RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 MTHFD1P11586 935 aaKnown RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 PTPN5P54829 565 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 OGFOD2Q6N063 350 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 CRTC3Q6UUV7 619 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 RALGPS2Q86X27 583 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 RGL4Q8IZJ4 473 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 GFM2Q969S9 779 aaKnown RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 TMEM159Q96B96 161 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 OR2AG1Q9H205 316 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 CMTM6Q9NX76 183 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 SNX13Q9Y5W8 968 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 WNT9AO14904 365 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 SGTAO43765 313 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 PRR35P0CG20 571 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 PSMD8P48556 350 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 TMEM115Q12893 351 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 DOK6Q6PKX4 331 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 ETFBKMTQ8IXQ9 262 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 CDC26Q8NHZ8 85 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 BTN2A2Q8WVV5 523 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 SELENOMQ8WWX9 145 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 ASB11Q8WXH4 323 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 GLYATL1Q969I3 302 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 TMEM181Q9P2C4 612 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 FBXO10Q9UK96 956 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 ZFC3H1O60293 1989 aaKnown RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 RECQL5O94762 991 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-201ENST00000279247 SLC6A2P23975 617 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 ZDHHC20Q5W0Z9 365 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 NEK5Q6P3R8 708 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 DHFR2Q86XF0 187 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 KRTCAP2Q8N6L1 136 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 ASZ1Q8WWH4 475 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 ZSCAN5AQ9BUG6 496 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 HPS4Q9NQG7 708 aa17.53■□□□□ 0.4
CAPN1-201ENST00000279247 A0A0C4DFX4 3053 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 A0A1W2PP18 115 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 STAMBPO95630 424 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 ATP6V1B2P21281 511 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 MAP4P27816 1152 aaKnown RBP17.52■□□□□ 0.4
CAPN1-201ENST00000279247 PRKG2Q13237 762 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 RCAN2Q14206 197 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 C9orf64Q5T6V5 341 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 DPPA4Q7L190 304 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 MCOLN3Q8TDD5 553 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 OR8D1Q8WZ84 308 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 SLC32A1Q9H598 525 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 ELOVL6Q9H5J4 265 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 DYRK4Q9NR20 520 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 GID8Q9NWU2 228 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 BCAP29Q9UHQ4 241 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 DTNAQ9Y4J8 743 aa17.52■□□□□ 0.4
CAPN1-201ENST00000279247 HOXC11O43248 304 aaPredicted RBP17.52■□□□□ 0.39
CAPN1-201ENST00000279247 LRATO95237 230 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 MATN4O95460 622 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 CLDN9O95484 217 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 EPORP19235 508 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 SOX9P48436 509 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 MTPNP58546 118 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 KLC1Q07866 573 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 TMEM154Q6P9G4 183 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 RTL10Q7L3V2 364 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 LIX1Q8N485 282 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 TRAM1L1Q8N609 369 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 ICA1LQ8NDH6 482 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 LRTOMTQ8WZ04 291 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 CHFRQ96EP1 664 aa17.52■□□□□ 0.39
CAPN1-201ENST00000279247 EME2A4GXA9 379 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-201ENST00000279247 BBIP1A8MTZ0 92 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 PDYNP01213 254 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 MT-ND1P03886 318 aa17.51■□□□□ 0.39
CAPN1-201ENST00000279247 PRNPP04156 253 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms