RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CSNK1DP48730 415 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CDH15P55291 814 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 PTGR1Q14914 329 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 MPPE1Q53F39 396 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 SULT1C3Q6IMI6 304 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CRTC1Q6UUV9 634 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 RFLNAQ6ZTI6 216 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 SPRED1Q7Z699 444 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 PROSER1Q86XN7 944 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 OR2AP1Q8NGE2 309 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 VPS50Q96JG6 964 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CGREF1Q99674 301 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ABCB8Q9NUT2 735 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 TMEM45AQ9NWC5 275 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 CCL27Q9Y4X3 112 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 K7EPI3 171 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ACOX3O15254 700 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 RASAL1O95294 804 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 SRCP12931 536 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 LAG3P18627 525 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 JAK1P23458 1154 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 MERTKQ12866 999 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 PWP1Q13610 501 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ADRM1Q16186 407 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 IMPG1Q17R60 797 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 LRRC73Q5JTD7 316 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 TMTC4Q5T4D3 741 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 LRRC66Q68CR7 880 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 GLYATQ6IB77 296 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 TBC1D21Q8IYX1 336 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ZNF786Q8N393 782 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 LIX1Q8N485 282 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 UBTD2Q8WUN7 234 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ZNF689Q96CS4 500 aaPredicted RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 NSMCE2Q96MF7 247 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 MAGEL2Q9UJ55 1249 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 ZNF490Q9ULM2 529 aaPredicted RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 EIF3LQ9Y262 564 aaKnown RBP12.64□□□□□ -0.39
CPSF6-201ENST00000266679 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
CPSF6-201ENST00000266679 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 A0A1W2PRU2 124 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 DYTNA2CJ06 578 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 LOC730098B7Z3J9 87 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 SLC28A1O00337 649 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 DFNA5O60443 496 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 SEC24DO94855 1032 aaPredicted RBP12.63□□□□□ -0.39
CPSF6-201ENST00000266679 LDLRP01130 860 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 NPPAP01160 153 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 UMPSP11172 480 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 ZNF23P17027 643 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 ARHGEF7Q14155 803 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 CRY1Q16526 586 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 TTLL9Q3SXZ7 439 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
CPSF6-201ENST00000266679 HTR3DQ70Z44 454 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 TMC8Q8IU68 726 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 CMTM8Q8IZV2 173 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 CPXM2Q8N436 756 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 PAPD5Q8NDF8 572 aaKnown RBP12.63□□□□□ -0.39
CPSF6-201ENST00000266679 FIBINQ8TAL6 211 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 OSCP1Q8WVF1 389 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 TMIGD2Q96BF3 282 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 MTFMTQ96DP5 389 aaKnown RBP12.63□□□□□ -0.39
CPSF6-201ENST00000266679 ASIC4Q96FT7 647 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 FBXL20Q96IG2 436 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 ZDHHC6Q9H6R6 413 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 KCTD5Q9NXV2 234 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 TRPS1Q9UHF7 1281 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 PCDHB3Q9Y5E6 796 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 NCOR1O75376 2440 aa12.63□□□□□ -0.39
CPSF6-201ENST00000266679 TRAV19A0A0A6YYK7 116 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 H3BSA7 217 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 LEFTY2O00292 366 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 ARNTLO00327 626 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 MANBAO00462 879 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 TGM5O43548 720 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 KCNH1O95259 989 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 CLIC3O95833 236 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 MYF6P23409 242 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 SLC7A9P82251 487 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 MAP7Q14244 749 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 KIAA0040Q15053 153 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 SLC44A4Q53GD3 710 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 PYCR3Q53H96 274 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
CPSF6-201ENST00000266679 TTC33Q6PID6 262 aaPredicted RBP12.62□□□□□ -0.39
CPSF6-201ENST00000266679 DET1Q7L5Y6 550 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms