RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DSELQ8IZU8 1212 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 CLDN19Q8N6F1 224 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 OR1L3Q8NH93 324 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 STYXQ8WUJ0 223 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 MIB2Q96AX9 1013 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 LRFN5Q96NI6 719 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 SLC29A3Q9BZD2 475 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 TFB2MQ9H5Q4 396 aaKnown RBP11.88□□□□□ -0.51
TRAF4-202ENST00000262396 NLE1Q9NVX2 485 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PIH1D1Q9NWS0 290 aaKnown RBP11.88□□□□□ -0.51
TRAF4-202ENST00000262396 POLG2Q9UHN1 485 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 ANAPC5Q9UJX4 755 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 TCFL5Q9UL49 500 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 ISM1B1AKI9 464 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 BTN3A3O00478 584 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 LIN7AO14910 233 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF749O43361 778 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 LDB2O43679 373 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 OR2B3O76000 313 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 CD63P08962 238 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 GP1BBP13224 206 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 PVRP15151 417 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 MSNP26038 577 aaKnown RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 PDHA2P29803 388 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 CDKN1CP49918 316 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 CSE1LP55060 971 aaKnown RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 PLOD1Q02809 727 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 IL10RAQ13651 578 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 PLEKHS1Q5SXH7 462 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 SEL1L2Q5TEA6 688 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 C1orf189Q5VU69 101 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 LYPLAL1Q5VWZ2 237 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 AADACL2Q6P093 401 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 MED25Q71SY5 747 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 TMEM102Q8N9M5 508 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 CLEC1AQ8NC01 280 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 TCTN2Q96GX1 697 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 CDKN2AIPNLQ96HQ2 116 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 C19orf43Q9BQ61 176 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 DPH2Q9BQC3 489 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 GORASP1Q9BQQ3 440 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 GPR83Q9NYM4 423 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 IFT80Q9P2H3 777 aaPredicted RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 IMPACTQ9P2X3 320 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 PCDHGA9Q9Y5G4 932 aaKnown RBP11.87□□□□□ -0.51
TRAF4-202ENST00000262396 AP1M2Q9Y6Q5 423 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 DUSP10Q9Y6W6 482 aa11.87□□□□□ -0.51
TRAF4-202ENST00000262396 BLACEA4D250 179 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 MIF4GDA9UHW6 222 aaKnown RBP11.86□□□□□ -0.51
TRAF4-202ENST00000262396 KLHL41O60662 606 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 IFNB1P01574 187 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 IGHEP01854 428 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 RPN2P04844 631 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ALPPP05187 535 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 VARSP26640 1264 aaKnown RBP11.86□□□□□ -0.51
TRAF4-202ENST00000262396 FOLR3P41439 243 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF75DP51815 510 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 PRAMEP78395 509 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ABRQ12979 859 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 RAPSNQ13702 412 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ITIH4Q14624 930 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 NCF4Q15080 339 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 DBN1Q16643 649 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 NADK2Q4G0N4 442 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 SPESP1Q6UW49 350 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 TRIM73Q86UV7 250 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 TBC1D21Q8IYX1 336 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 C19orf47Q8N9M1 422 aaKnown RBP11.86□□□□□ -0.51
TRAF4-202ENST00000262396 SLC38A9Q8NBW4 561 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 OR5AR1Q8NGP9 310 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 OR6P1Q8NGX9 317 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 FER1L6-AS2Q96M78 137 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 IP6K3Q96PC2 410 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 TMEM121Q9BTD3 319 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 NDC1Q9BTX1 674 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 OR52A5Q9H2C5 316 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ARNT2Q9HBZ2 717 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 PCMTD2Q9NV79 361 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 LUZP4Q9P127 313 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF106Q9H2Y7 1883 aaKnown RBP11.85□□□□□ -0.51
TRAF4-202ENST00000262396 AGAP14A8MT82 685 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 BTNL10A8MVZ5 291 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 SGTAO43765 313 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 METTL18O95568 372 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 FTCDO95954 541 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 PDGFAP04085 211 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 PRSS56P0CW18 603 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 ALAS2P22557 587 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 GNLYP22749 145 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 CDH17Q12864 832 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 TMED2Q15363 201 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 CYP2A13Q16696 494 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms