RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TRPV3Q8NET8 790 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 OR4E2Q8NGC2 313 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 WDR36Q8NI36 951 aaKnown RBP13.67□□□□□ -0.22
CDH1-201ENST00000261769 GLYATL1Q969I3 302 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 CMTM7Q96FZ5 175 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 TMLHEQ9NVH6 421 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 NLE1Q9NVX2 485 aaPredicted RBP13.67□□□□□ -0.22
CDH1-201ENST00000261769 GRHL1Q9NZI5 618 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 C3orf18Q9UK00 162 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 CFL2Q9Y281 166 aa13.67□□□□□ -0.22
CDH1-201ENST00000261769 MAGEA13PA6NCF6 341 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 MPIP34949 423 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 GSSP48637 474 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 NRG3P56975 720 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 HNRNPKP61978 463 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH1-201ENST00000261769 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 C1orf220Q5T0J3 134 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 C11orf65Q8NCR3 313 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 VPS35Q96QK1 796 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 IDH2P48735 452 aaKnown RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 SLC34A1Q06495 639 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 KCNJ11Q14654 390 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 FBXO48Q5FWF7 155 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 RTL4Q6ZR62 310 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 FGF13Q92913 245 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 ART5Q96L15 291 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 HAPLN2Q9GZV7 340 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 C19orf25Q9UFG5 118 aaPredicted RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 WFS1O76024 890 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 CSNK2A2P19784 350 aaPredicted RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 OC90Q02509 493 aaPredicted RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 SEMA3AQ14563 771 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 TMEM154Q6P9G4 183 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 DEPDC4Q8N2C3 294 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 CLDN19Q8N6F1 224 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 ANKRD49Q8WVL7 239 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 ABTB1Q969K4 478 aaPredicted RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 IMP4Q96G21 291 aaKnown RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
CDH1-201ENST00000261769 PDP2Q9P2J9 529 aa13.66□□□□□ -0.22
CDH1-201ENST00000261769 PDPK1O15530 556 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 SEMA4FO95754 770 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TOP3BO95985 862 aaKnown RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 IFNGP01579 166 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 ADSLP30566 484 aaPredicted RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 SLC7A2P52569 658 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 ZNF460Q14592 562 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 PLEKHS1Q5SXH7 462 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 MLIPQ5VWP3 458 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 IZUMO2Q6UXV1 221 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 HCAR2Q8TDS4 363 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 KIFC1Q9BW19 673 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TAC3Q9UHF0 121 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 ADAM30Q9UKF2 790 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 SAMHD1Q9Y3Z3 626 aaKnown RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 DCLK1O15075 740 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 MAN1A2O60476 641 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 STX11O75558 287 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 PTX3P26022 381 aaPredicted RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 TALDO1P37837 337 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 GRIA1P42261 906 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 RGS8P57771 180 aaPredicted RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 EML3Q32P44 896 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 CLEC6AQ6EIG7 209 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TERB1Q8NA31 727 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 KCNJ9Q92806 393 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TRMT2BQ96GJ1 504 aaKnown RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 MTERF1Q99551 399 aaKnown RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 PCDHGA2Q9Y5H1 932 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 DUXAA6NLW8 204 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 CAPN14A8MX76 684 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 KIAA0355O15063 1070 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 RGS5O15539 181 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 NRLP54845 237 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 USP46P62068 366 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 SPIBQ01892 262 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 CYP4F3Q08477 520 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 RNFT2Q96EX2 444 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 CLSTN3Q9BQT9 956 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 NECTIN3Q9NQS3 549 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 COL18A1P39060 1754 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 TTC34A8MYJ7 566 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 UGT2B17O75795 530 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 DNAJB1P25685 340 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 GKP32189 559 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
CDH1-201ENST00000261769 GSTM4Q03013 218 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 ARHGAP40Q5TG30 622 aa13.65□□□□□ -0.22
CDH1-201ENST00000261769 Q8N9G6 341 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms