RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 FBXO43Q4G163 708 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 LAIR1Q6GTX8 287 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 ARHGAP36Q6ZRI8 547 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 SLC51BQ86UW2 128 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 SLC2A14Q8TDB8 520 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 PYCR2Q96C36 320 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 ZFYVE19Q96K21 471 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 MFSD1Q9H3U5 465 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 ATP13A2Q9NQ11 1180 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 RLFQ13129 1914 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 ELOVL7A1L3X0 281 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 ADM5C9JUS6 153 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 CD3EAPO15446 510 aaKnown RBP20.07■□□□□ 0.8
RARA-201ENST00000254066 RECQL5O94762 991 aaPredicted RBP20.07■□□□□ 0.8
RARA-201ENST00000254066 GJB1P08034 283 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 LIPAP38571 399 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 NRIP1P48552 1158 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 TBRG1Q3YBR2 411 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 PARP15Q460N3 678 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 TOR1AIP1Q5JTV8 583 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 SLC46A3Q7Z3Q1 461 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 GPR149Q86SP6 731 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 TOR1AIP2Q8NFQ8 470 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 OR52K2Q8NGK3 314 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 FAM162AQ96A26 154 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 ZNF668Q96K58 619 aaPredicted RBP20.07■□□□□ 0.8
RARA-201ENST00000254066 PSKH2Q96QS6 385 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 UQCC2Q9BRT2 126 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 PHIPQ8WWQ0 1821 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 SHROOM3Q8TF72 1996 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 LOC285556D6RIA3 1793 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 CDK2AP1O14519 115 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 DFNA5O60443 496 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 MLYCDO95822 493 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 RPS17P08708 135 aaKnown RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 IL7P13232 177 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 SOX6P35712 828 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 PIK3CBP42338 1070 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 AP2S1P53680 142 aaPredicted RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 COX10Q12887 443 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 BCL7AQ4VC05 210 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 C6orf136Q5SQH8 315 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 COL13A1Q5TAT6 717 aaPredicted RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 NXNL2Q5VZ03 156 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 XKRXQ6PP77 449 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 FAM126BQ8IXS8 530 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 CHPFQ8IZ52 775 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 ST13P5Q8NFI4 369 aaPredicted RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 DUSP16Q9BY84 665 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 NOSIPQ9Y314 301 aaKnown RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 CXCR6O00574 342 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 F9P00740 461 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 PFKLP17858 780 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 HNF4AP41235 474 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 ARHGDIAP52565 204 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 LIMK1P53667 647 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 ELP6Q0PNE2 266 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 SMU1Q2TAY7 513 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 KDM4DQ6B0I6 523 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 NDRG1Q92597 394 aaKnown RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 EXT2Q93063 718 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 CDCA5Q96FF9 252 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 SDHCQ99643 169 aaPredicted RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 RGS18Q9NS28 235 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
RARA-201ENST00000254066 IL20Q9NYY1 176 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 NEUROG3Q9Y4Z2 214 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 ZSWIM8A7E2V4 1837 aa20.06■□□□□ 0.8
RARA-201ENST00000254066 LRRC14BA6NHZ5 514 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 H3BQ06 376 aaPredicted RBP20.05■□□□□ 0.8
RARA-201ENST00000254066 I6L893 689 aaPredicted RBP20.05■□□□□ 0.8
RARA-201ENST00000254066 GABRDO14764 452 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 KERAO60938 352 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 ARF4P18085 180 aaPredicted RBP20.05■□□□□ 0.8
RARA-201ENST00000254066 POLR2CP19387 275 aaPredicted RBP20.05■□□□□ 0.8
RARA-201ENST00000254066 GADD45AP24522 165 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 NOGQ13253 232 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 OR4D1Q15615 310 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 CPZQ66K79 652 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 BLOC1S5Q8TDH9 187 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 MRGPRX2Q96LB1 330 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 OR2A14Q96R47 310 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 COQ7Q99807 217 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 ITM2CQ9NQX7 267 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 TBC1D24Q9ULP9 559 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 TEX51A0A1B0GUA7 166 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 WNT10BO00744 389 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 STX16O14662 325 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 MATN3O15232 486 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 PM20D1Q6GTS8 502 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 CYP4Z1Q86W10 505 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 APOBEC3FQ8IUX4 373 aaKnown RBP20.05■□□□□ 0.8
RARA-201ENST00000254066 FBXO39Q8N4B4 442 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 STAG3L4Q8TBR4 150 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 TNIP3Q96KP6 325 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 RIBC2Q9H4K1 309 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 PLSCR3Q9NRY6 295 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 BOLA1Q9Y3E2 137 aa20.05■□□□□ 0.8
RARA-201ENST00000254066 SPEF1Q9Y4P9 236 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms