RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ARHGAP10A1A4S6 786 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 LOC730098B7Z3J9 87 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 MT-ND1P03886 318 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 BMP2P12643 396 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 PSMA4P25789 261 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 MTPNP58546 118 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 IRX1P78414 480 aaPredicted RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 THEMIS2Q5TEJ8 643 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 SULT1C3Q6IMI6 304 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 DLEU7Q6UYE1 221 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 METTL3Q86U44 580 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 SMG7Q92540 1137 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 MTFMTQ96DP5 389 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 BBS2Q9BXC9 721 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 BRD9Q9H8M2 597 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNHIT2Q9UHR6 403 aa18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 MRPS23Q9Y3D9 190 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-201ENST00000253754 PLOD2O00469 737 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 FAM58BPP0C7Q3 252 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 ETS2P15036 469 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 CEBPBP17676 345 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 OR4D2P58180 307 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 CRY1Q16526 586 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 C11orf91Q3C1V1 193 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 CARD16Q5EG05 197 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 ITFG1Q8TB96 612 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 SORCS1Q8WY21 1168 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 MCCC1Q96RQ3 725 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 AGPAT4Q9NRZ5 378 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 MSRAQ9UJ68 235 aa18.31■□□□□ 0.52
PDLIM4-201ENST00000253754 TCRBV5S2A0A599 114 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 EPOPA6NHQ4 379 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 K7EPI3 171 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 HRH2P25021 359 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 HSPA14Q0VDF9 509 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 ZXDCQ2QGD7 858 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 ELMSAN1Q6PJG2 1045 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 VRK3Q8IV63 474 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 AHI1Q8N157 1196 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 CBR4Q8N4T8 237 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 METTL25Q8N6Q8 603 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 SKA2Q8WVK7 121 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 RPF2Q9H7B2 306 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 SLC28A3Q9HAS3 691 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 SLC25A13Q9UJS0 675 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNF197O14709 1029 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 TNFAIP8O95379 198 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 TFAP2AP05549 437 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 EPORP19235 508 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 TTLL9Q3SXZ7 439 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 NAT16Q8N8M0 369 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 UBTD2Q8WUN7 234 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 ISG20Q96AZ6 181 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 C19orf43Q9BQ61 176 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 DUS2Q9NX74 493 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 ARL15Q9NXU5 204 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 KCTD5Q9NXV2 234 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNF490Q9ULM2 529 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 PDE10AQ9Y233 779 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 NEUROG3Q9Y4Z2 214 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 COL6A3P12111 3177 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 VCANP13611 3396 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 PIKFYVEQ9Y2I7 2098 aa18.3■□□□□ 0.52
PDLIM4-201ENST00000253754 RFXAPO00287 272 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 PABPC1P11940 636 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 IL10P22301 178 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 GGT5P36269 586 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 DUSP6Q16828 381 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 IRAK1BP1Q5VVH5 260 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 TMEM215Q68D42 235 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 PTRH1Q86Y79 214 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 SCAMP4Q969E2 229 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 MTG2Q9H4K7 406 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNF696Q9H7X3 374 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 PPIL1Q9Y3C6 166 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 HNRNPRO43390 633 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 STK16O75716 305 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 POP4O95707 220 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 CLPTM1O96005 669 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 FESP07332 822 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 ENO2P09104 434 aaPredicted RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 PABPC4LP0CB38 370 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 EPB42P16452 691 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 VARSP26640 1264 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 SPINT3P49223 89 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 RPIAP49247 311 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 EEFSECP57772 596 aaKnown RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 PLOD1Q02809 727 aaPredicted RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 ADIPOR2Q86V24 386 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 CARM1Q86X55 608 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 HID1Q8IV36 788 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 DPP10Q8N608 796 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 KRTCAP2Q8N6L1 136 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 VN1R2Q8NFZ6 395 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms