RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CCDC68Q9H2F9 335 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 LATS2Q9NRM7 1088 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 IL1RAPL1Q9NZN1 696 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 CRYL1Q9Y2S2 319 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 COMMD10Q9Y6G5 202 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 ADAMTS20P59510 1910 aa23.67■■□□□ 1.38
SDF2L1-201ENST00000248958 FREM2Q5SZK8 3169 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 S1PR4O95977 384 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 SHMT2P34897 504 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 CSE1LP55060 971 aaKnown RBP23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 UCNP55089 124 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 C2orf54Q08AI8 447 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 MSS51Q4VC12 460 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 UNC5DQ6UXZ4 953 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 KCNMB4Q86W47 210 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 AMIGO1Q86WK6 493 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 OR5AR1Q8NGP9 310 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 TRIM44Q96DX7 344 aaPredicted RBP23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 NAF1Q96HR8 494 aaKnown RBP23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 ERP44Q9BS26 406 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 SIDT1Q9NXL6 827 aaKnown RBP23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 FOXJ2Q9P0K8 574 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 CDC23Q9UJX2 597 aa23.66■■□□□ 1.38
SDF2L1-201ENST00000248958 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 E5RI56 91 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 KIF2AO00139 706 aaPredicted RBP23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 KLK10O43240 276 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 NELFEP18615 380 aaKnown RBP23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 POLR2CP19387 275 aaPredicted RBP23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 CHRM3P20309 590 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 RPL21P46778 160 aaKnown RBP23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 SEPHS1P49903 392 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 PRKG2Q13237 762 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 CTBP1Q13363 440 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 WHRNQ9P202 907 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 FBXO5Q9UKT4 447 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 SNX24Q9Y343 169 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 B3GALT1Q9Y5Z6 326 aa23.65■■□□□ 1.38
SDF2L1-201ENST00000248958 STMND1H3BQB6 276 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 POLR1CO15160 346 aaPredicted RBP23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 RAD51CO43502 376 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 KIF1CO43896 1103 aaKnown RBP23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 ITPKBP27987 946 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 ATP5DP30049 168 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 SLC1A2P43004 574 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 TLE3Q04726 772 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 CALCOCO2Q13137 446 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 CBLBQ13191 982 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 IL11RAQ14626 422 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 HSP90AA5PQ58FG0 334 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 ANKS6Q68DC2 871 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 TTC23LQ6PF05 361 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 VRK3Q8IV63 474 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 DENND6AQ8IWF6 608 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 SLC41A2Q96JW4 573 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 FOPNLQ96NB1 174 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 MAP3K3Q99759 626 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 RAB17Q9H0T7 212 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 C1GALT1Q9NS00 363 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 UTP11Q9Y3A2 253 aaKnown RBP23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 TEX264Q9Y6I9 313 aa23.64■■□□□ 1.37
SDF2L1-201ENST00000248958 C2orf74A8MZ97 194 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 NIPSNAP2O75323 286 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 ELK3P41970 407 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 ARL4DP49703 201 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 PPP1CAP62136 330 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 CLN3Q13286 438 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 DCUN1D3Q8IWE4 304 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 SIDT2Q8NBJ9 832 aaKnown RBP23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 FBXO6Q9NRD1 293 aaPredicted RBP23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 IARS2Q9NSE4 1012 aaKnown RBP23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 OR6C2Q9NZP2 312 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 KLHL42Q9P2K6 505 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 ZC3H7BQ9UGR2 993 aaKnown RBP23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 POMT2Q9UKY4 750 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 ICKQ9UPZ9 632 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 SSUH2Q9Y2M2 353 aa23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 TDRKHQ9Y2W6 561 aaKnown RBP23.63■■□□□ 1.37
SDF2L1-201ENST00000248958 DMXL2Q8TDJ6 3036 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 ZZEF1O43149 2961 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 IGHV5-51A0A0C4DH38 117 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 GSAPA4D1B5 854 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 E7ESA3 106 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 BTN3A1O00481 513 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 BANF1O75531 89 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 URI1O94763 535 aaPredicted RBP23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 ZBTB11O95625 1053 aaPredicted RBP23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 KPNA2P52292 529 aaKnown RBP23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 ACY1Q03154 408 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 FOXM1Q08050 763 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 ABRQ12979 859 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 WHAMMP3Q1A5X7 153 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 COL28A1Q2UY09 1125 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 TTLL9Q3SXZ7 439 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 ZNF789Q5FWF6 425 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 C19orf48Q6RUI8 117 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 KIAA0408Q6ZU52 694 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 BPHLQ86WA6 291 aaPredicted RBP23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 CNTN4Q8IWV2 1026 aa23.62■■□□□ 1.37
SDF2L1-201ENST00000248958 ZBTB2Q8N680 514 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms