RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CRYMQ14894 314 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 CTSL3PQ5NE16 218 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 PLEKHS1Q5SXH7 462 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 C19orf48Q6RUI8 117 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 OTOAQ7RTW8 1153 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 AMIGO1Q86WK6 493 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 DCUN1D3Q8IWE4 304 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 PDIK1LQ8N165 341 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 KRT222Q8N1A0 295 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 C17orf53Q8N3J3 647 aaPredicted RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 OR5AR1Q8NGP9 310 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 GABPB2Q8TAK5 448 aaPredicted RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 SNRNP27Q8WVK2 155 aaKnown RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 LRRC39Q96DD0 335 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 SNF8Q96H20 258 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 BIRC8Q96P09 236 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 TRIM56Q9BRZ2 755 aaKnown RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 PITPNM3Q9BZ71 974 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 TWSG1Q9GZX9 223 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 SRMSQ9H3Y6 488 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 PRORYQ9H606 182 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 BTRCQ9Y297 605 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 MRFAP1Q9Y605 127 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 BTN3A1O00481 513 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 KIF1CO43896 1103 aaKnown RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 ZBTB11O95625 1053 aaPredicted RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 FGF5P12034 268 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 ITGB6P18564 788 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 SLC1A2P43004 574 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 SEPHS1P49903 392 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 KPNA2P52292 529 aaKnown RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 HSD11B2P80365 405 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 ACY1Q03154 408 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 GBX1Q14549 363 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 BRD3Q15059 726 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 HIF1AQ16665 826 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 SPANXN3Q5MJ09 141 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 SYT10Q6XYQ8 523 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 CENPUQ71F23 418 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 ZNF572Q7Z3I7 529 aaPredicted RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 BPHLQ86WA6 291 aaPredicted RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 BBOF1Q8ND07 529 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 SPATA4Q8NEY3 305 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 OR4E2Q8NGC2 313 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 GSDMBQ8TAX9 411 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 CCNL2Q96S94 520 aaPredicted RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 EBNA1BP2Q99848 306 aaKnown RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 C1GALT1Q9NS00 363 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 OR6C2Q9NZP2 312 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 ICKQ9UPZ9 632 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 TMEM184BQ9Y519 407 aaPredicted RBP12.4□□□□□ -0.42
VPREB3-201ENST00000248948 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 FAM169AQ9Y6X4 670 aa12.4□□□□□ -0.42
VPREB3-201ENST00000248948 LOC400499M0QZD8 3231 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 IGHV5-51A0A0C4DH38 117 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 TEX51A0A1B0GUA7 166 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 DLGAP3O95886 979 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 MSL3P1P0C860 447 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PKMP14618 531 aaKnown RBP12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PKLRP30613 574 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 ARL4DP49703 201 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 RAB28P51157 221 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 FOXM1Q08050 763 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 VAC14Q08AM6 782 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 TUBB3Q13509 450 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
VPREB3-201ENST00000248948 NAPRTQ6XQN6 538 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 GPR155Q7Z3F1 870 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 KCNMB4Q86W47 210 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PPP1R3BQ86XI6 285 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 VRK3Q8IV63 474 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 CNTN4Q8IWV2 1026 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 D2HGDHQ8N465 521 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 SIDT2Q8NBJ9 832 aaKnown RBP12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PHC3Q8NDX5 983 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 KCNJ9Q92806 393 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 FCRL4Q96PJ5 515 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 OR6C1Q96RD1 312 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 KRT12Q99456 494 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 APMAPQ9HDC9 416 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PDE7BQ9NP56 450 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 LATS2Q9NRM7 1088 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 IL1RAPL1Q9NZN1 696 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PILRAQ9UKJ1 303 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 CRYL1Q9Y2S2 319 aa12.39□□□□□ -0.43
VPREB3-201ENST00000248948 PIPSLA2A3N6 862 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms