RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CFAP99D6REC4 459 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 PSMD11O00231 422 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 WNT9AO14904 365 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 KATNA1O75449 491 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 AP2A2O94973 939 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 OTCP00480 354 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 HOXB2P14652 356 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 RPIAP49247 311 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 CTSCP53634 463 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 SESN3P58005 492 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 RASGEF1AQ8N9B8 481 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 METTL6Q8TCB7 284 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 SLC25A23Q9BV35 468 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 SLC12A9Q9BXP2 914 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 C8orf33Q9H7E9 229 aaPredicted RBP22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 CD93Q9NPY3 652 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 OPTCQ9UBM4 332 aa22.83■■□□□ 1.25
SYNGR3-201ENST00000248121 H0Y858 1186 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 INPP4BO15327 924 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 SLC34A1Q06495 639 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 GRSF1Q12849 480 aaKnown RBP eCLIP22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 UBE2R2Q712K3 238 aaPredicted RBP22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 NRSN1Q8IZ57 195 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 MIER2Q8N344 545 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 HDDC3Q8N4P3 179 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 NDE1Q9NXR1 346 aa22.83■■□□□ 1.24
SYNGR3-201ENST00000248121 C9JVG2 144 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 K7EPI3 171 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 NRP2O60462 931 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 MPC1LP0DKB6 136 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 GCKP35557 465 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 ARL1P40616 181 aaPredicted RBP22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 CCDC6Q16204 474 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 TMEM52BQ4KMG9 183 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 FAM46CQ5VWP2 391 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 TRIM74Q86UV6 250 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 OR2T3Q8NH03 318 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 RPLP0P6Q8NHW5 317 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 ELMO1Q92556 727 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 ATP6V1E2Q96A05 226 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 HBEGFQ99075 208 aa22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 CNOT6Q9ULM6 557 aaKnown RBP22.82■■□□□ 1.24
SYNGR3-201ENST00000248121 KRT87PA6NCN2 255 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 GFYI3L273 518 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 LEXMQ3ZCV2 418 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 LDLRAP1Q5SW96 308 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 SPATA19Q7Z5L4 167 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 MILR1Q7Z6M3 343 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 RETREG3Q86VR2 466 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 RASGRP3Q8IV61 690 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 NUS1Q96E22 293 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 PARVBQ9HBI1 364 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 SLC52A3Q9NQ40 469 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 AIG1Q9NVV5 245 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 ARL15Q9NXU5 204 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 STOML1Q9UBI4 398 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 NPC1O15118 1278 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 MATN4O95460 622 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 C8GP07360 202 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 ANXA5P08758 320 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 IDO1P14902 403 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 EPORP19235 508 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 DRD1P21728 446 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 PSME3P61289 254 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 GSTA3Q16772 222 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 MMEL1Q495T6 779 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 CDKL4Q5MAI5 379 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 C6orf136Q5SQH8 315 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 ZNF776Q68DI1 518 aaPredicted RBP22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 METTL2BQ6P1Q9 378 aaKnown RBP22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 SFRP1Q8N474 314 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 RNF148Q8N7C7 305 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 SKA2Q8WVK7 121 aaPredicted RBP22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 TEX37Q96LM6 180 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 SERPINI1Q99574 410 aa22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 NDRG2Q9UN36 371 aaKnown RBP22.81■■□□□ 1.24
SYNGR3-201ENST00000248121 MRASO14807 208 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 TSPAN6O43657 245 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 STK16O75716 305 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 RNASEH2AO75792 299 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 SLCO2B1O94956 709 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 ENO2P09104 434 aaPredicted RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 XRCC1P18887 633 aaPredicted RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 CAPN3P20807 821 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 MSX2P35548 267 aaPredicted RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 GGT5P36269 586 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 ZFP36L2P47974 494 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 MRPL19P49406 292 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 CDKL1Q00532 357 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 CCINQ13939 588 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 ABRAXAS2Q15018 415 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 SWT1Q5T5J6 900 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 PRPF38BQ5VTL8 546 aaKnown RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 C8orf82Q6P1X6 216 aaPredicted RBP22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 IL27RAQ6UWB1 636 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 TMEM92Q6UXU6 159 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 CYP2U1Q7Z449 544 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 PYDC1Q8WXC3 89 aa22.8■■□□□ 1.24
SYNGR3-201ENST00000248121 FAM3CQ92520 227 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms