RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 REV3LO60673 3130 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 FAM234BA2RU67 622 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 NME4O00746 187 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 WDR47O94967 919 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 G6PDP11413 515 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 TLR1Q15399 786 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 PAGE3Q5JUK9 113 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 PRMT9Q6P2P2 845 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 VITQ6UXI7 678 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 LRRC70Q7Z2Q7 622 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 TRIM46Q7Z4K8 759 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 SLC15A3Q8IY34 581 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 PQLC1Q8N2U9 271 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 TERB1Q8NA31 727 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 PBX4Q9BYU1 374 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 ACTL8Q9H568 366 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 DZANK1Q9NVP4 752 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 GID8Q9NWU2 228 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 C6orf203Q9P0P8 240 aaPredicted RBP18.07■□□□□ 0.48
HOXC11-201ENST00000243082 KLQ9UEF7 1012 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 LRCH1Q9Y2L9 728 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
HOXC11-201ENST00000243082 KRT87PA6NCN2 255 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ANTXRLA6NF34 631 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 QSOX1O00391 747 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 PLK4O00444 970 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 MANBAO00462 879 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 AREL1O15033 823 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 TSPAN6O43657 245 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ULK1O75385 1050 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 EEDO75530 441 aaKnown RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CLDN9O95484 217 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CYP2A7P20853 494 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 SLC6A2P23975 617 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 PEX2P28328 305 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 HNMTP50135 292 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 TMEM115Q12893 351 aaPredicted RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CAPRIN1Q14444 709 aaKnown RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ELAVL3Q14576 367 aaKnown RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 LRRC36Q1X8D7 754 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 IL23RQ5VWK5 629 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 SPATA24Q86W54 205 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 PPP3R2Q96LZ3 170 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CNOT6Q9ULM6 557 aaKnown RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 PRSS51A0A1B0GVH4 220 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CCDC154A6NI56 674 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ANKRD28O15084 1053 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 INPP4BO15327 924 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 DNAJA2O60884 412 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 SOD1P00441 154 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 OPRD1P41143 372 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 MAGEA10P43363 369 aaPredicted RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 PRLHRP49683 370 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 PTCHD3Q3KNS1 767 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 NEK5Q6P3R8 708 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 FBXL19Q6PCT2 694 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CYP20A1Q6UW02 462 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CYP2U1Q7Z449 544 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ZFAND4Q86XD8 727 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 MCOLN3Q8TDD5 553 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 N4BP2L2Q92802 583 aaPredicted RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 USP7Q93009 1102 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CDCA3Q99618 268 aaPredicted RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 SLC29A3Q9BZD2 475 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 CMTM6Q9NX76 183 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 EPS15L1Q9UBC2 864 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ZNHIT2Q9UHR6 403 aa18.06■□□□□ 0.48
HOXC11-201ENST00000243082 ZNF490Q9ULM2 529 aaPredicted RBP18.06■□□□□ 0.48
HOXC11-201ENST00000243082 COL4A3Q01955 1670 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 SLC28A1O00337 649 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 RGS14O43566 566 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 C8BP07358 591 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 AP1S2P56377 157 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 FOXM1Q08050 763 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 PRKG2Q13237 762 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 TRIP10Q15642 601 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 ANO7Q6IWH7 933 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 NLRP8Q86W28 1048 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 PYCR2Q96C36 320 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 KLHL4Q9C0H6 718 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 ZFP14Q9HCL3 533 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 HCN2Q9UL51 889 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 POLR3HQ9Y535 204 aaPredicted RBP18.05■□□□□ 0.48
HOXC11-201ENST00000243082 PCDHA9Q9Y5H5 950 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 TBC1D3BA6NDS4 549 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 ATG13O75143 517 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 RECQL5O94762 991 aaPredicted RBP18.05■□□□□ 0.48
HOXC11-201ENST00000243082 ADRB3P13945 408 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 SLC2A4P14672 509 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 HMGCS1Q01581 520 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 FCHO2Q0JRZ9 810 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 ELP6Q0PNE2 266 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 NFYCQ13952 458 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 SMU1Q2TAY7 513 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 TIGD2Q4W5G0 525 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 SFT2D3Q587I9 215 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 OGFRL1Q5TC84 451 aaPredicted RBP18.05■□□□□ 0.48
HOXC11-201ENST00000243082 PDSS2Q86YH6 399 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 RGL4Q8IZJ4 473 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms