RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 UBDO15205 165 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 HSD17B1P14061 328 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 ITGB6P18564 788 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 MGAT1P26572 445 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 TPD52P55327 224 aaPredicted RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 KRR1Q13601 381 aaKnown RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 DAG1Q14118 895 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 CAPRIN1Q14444 709 aaKnown RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 RAB41Q5JT25 222 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 OTUD1Q5VV17 481 aaPredicted RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 SLC39A11Q8N1S5 342 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 PYROXD2Q8N2H3 581 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 NETO2Q8NC67 525 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 KCTD13Q8WZ19 329 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 MARVELD3Q96A59 401 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 TMEM169Q96HH4 297 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 RBBP8Q99708 897 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 NTN4Q9HB63 628 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 WASH6PQ9NQA3 447 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 INTS6Q9UL03 887 aaKnown RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 MTF2Q9Y483 593 aaPredicted RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 ZFC3H1O60293 1989 aaKnown RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 TNRC18O15417 2968 aaPredicted RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 MTMR11A4FU01 709 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 CD6P30203 668 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 C9orf50Q5SZB4 431 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 TTLQ8NG68 377 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 ZHX1-C8orf76Q96EF9 292 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 GIMAP5Q96F15 307 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 MMP27Q9H306 513 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 POLR3BQ9NW08 1133 aaPredicted RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 ASNSD1Q9NWL6 643 aa19.51■□□□□ 0.71
HOXC13-201ENST00000243056 EIF3KQ9UBQ5 218 aaKnown RBP19.51■□□□□ 0.71
HOXC13-201ENST00000243056 TRPC5OSA6NMA1 111 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 XPNPEP2O43895 674 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 TBC1D4O60343 1298 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 GLRBP48167 497 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 DEFA1P59665 94 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 DEFA3P59666 94 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 RHAGQ02094 409 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 ACOX1Q15067 660 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 PSMD5Q16401 504 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 TPRG1LQ5T0D9 272 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 GRTP1Q5TC63 336 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 ZNF517Q6ZMY9 492 aaPredicted RBP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 DPY19L3Q6ZPD9 716 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 BEND5Q7L4P6 421 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 NRARPQ7Z6K4 114 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 OR10Z1Q8NGY1 313 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 HERVK_113Q902F9 699 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 MBOAT4Q96T53 435 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 SEPHS2Q99611 448 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 PRRG3Q9BZD7 231 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 TASP1Q9H6P5 420 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 SCPEP1Q9HB40 452 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 OSER1Q9NX31 292 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 MAP10Q9P2G4 905 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 ANAPC2Q9UJX6 822 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 BCLAF3A2AJT9 711 aaKnown RBP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 HMX3A6NHT5 357 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 UPK1AO00322 258 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 TNFRSF10BO14763 440 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 LRIG2O94898 1065 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 ENDOD1O94919 500 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 LINC00271P0C7V0 271 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 CYP2A6P11509 494 aaPredicted RBP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 SULT1E1P49888 294 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 PPIGQ13427 754 aaKnown RBP eCLIP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 CES5AQ6NT32 575 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 FUNDC1Q8IVP5 155 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 TBC1D21Q8IYX1 336 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 DCP1BQ8IZD4 617 aaKnown RBP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 PAPD5Q8NDF8 572 aaKnown RBP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 CPNE1Q99829 537 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 UCK2Q9BZX2 261 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 AMBRA1Q9C0C7 1298 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.5■□□□□ 0.71
HOXC13-201ENST00000243056 DCSTAMPQ9H295 470 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 NMUR1Q9HB89 426 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 FAM118AQ9NWS6 357 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 PCDHGB6Q9Y5F9 930 aa19.5■□□□□ 0.71
HOXC13-201ENST00000243056 MYO9BQ13459 2157 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 M0QYT0 321 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 BET1O15155 118 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 EFEMP2O95967 443 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 PSMB9P28065 219 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 MATKP42679 507 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 CBX5P45973 191 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 LIMK2P53671 638 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 BSPRYQ5W0U4 402 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 CNSTQ6PJW8 725 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 LURAP1LQ8IV03 231 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 CCNYL1Q8N7R7 359 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 ROPN1LQ96C74 230 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 RNF157Q96PX1 679 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 ZBTB20Q9HC78 741 aaPredicted RBP19.49■□□□□ 0.71
HOXC13-201ENST00000243056 GLTPQ9NZD2 209 aa19.49■□□□□ 0.71
HOXC13-201ENST00000243056 EHD3Q9NZN3 535 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms