RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CAPN1P07384 714 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 RAB40ALP0C0E4 278 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 MTHFD1P11586 935 aaKnown RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 PECAM1P16284 738 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 RRADP55042 308 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 EIF3EP60228 445 aaKnown RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 CCNG2Q16589 344 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 VWA5B1Q5TIE3 1220 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 TMEM220Q6QAJ8 160 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 FAM151BQ6UXP7 276 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 ZNF517Q6ZMY9 492 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 CDKL3Q8IVW4 592 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 ACTL9Q8TC94 416 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 INPP5DQ92835 1189 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 OLFM3Q96PB7 478 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 CD180Q99467 661 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 NRTNQ99748 197 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 ACTR5Q9H9F9 607 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 ZBTB20Q9HC78 741 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-201ENST00000242776 MAGEE1Q9HCI5 957 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
DDX39A-201ENST00000242776 TCRBV7S2A1N4TA0A589 114 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 GSAPA4D1B5 854 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 H7C0C1 242 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 CCDC188H7C350 402 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 LRRTM2O43300 516 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 PMPCBO75439 489 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 MT-CYBP00156 380 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-201ENST00000242776 RBP3P10745 1247 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 RORAP35398 523 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 ATP5OP48047 213 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 LMAN1P49257 510 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 KRT33BQ14525 404 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 SIX1Q15475 284 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-201ENST00000242776 FNBP1LQ5T0N5 605 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 MLIPQ5VWP3 458 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 RAB43Q86YS6 212 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 HPS6Q86YV9 775 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 TFB1MQ8WVM0 346 aaKnown RBP13.4□□□□□ -0.26
DDX39A-201ENST00000242776 RUNDC3BQ96NL0 473 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-201ENST00000242776 OSGIN2Q9Y236 505 aa13.4□□□□□ -0.26
DDX39A-201ENST00000242776 PHF2O75151 1096 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 POLBP06746 335 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 PVRP15151 417 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 HLA-DPA1P20036 260 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 PREPP48147 710 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 PPIDQ08752 370 aaKnown RBP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 SLC9A5Q14940 896 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 NCF4Q15080 339 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 C1orf189Q5VU69 101 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 DARS2Q6PI48 645 aaKnown RBP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 ZC3H18Q86VM9 953 aaKnown RBP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 SLC25A41Q8N5S1 370 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 OR8K5Q8NH50 307 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 C1orf54Q8WWF1 131 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 FATE1Q969F0 183 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 IMP4Q96G21 291 aaKnown RBP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 QKIQ96PU8 341 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 VPS35Q96QK1 796 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 AP1M1Q9BXS5 423 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 SLC24A2Q9UI40 661 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 R3HDM2Q9Y2K5 976 aaKnown RBP13.39□□□□□ -0.27
DDX39A-201ENST00000242776 CSAG2Q9Y5P2 127 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 C2CD3Q4AC94 2353 aa13.39□□□□□ -0.27
DDX39A-201ENST00000242776 C9J4A7 227 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 LIASO43766 372 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 ZG16O60844 167 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 KRT38O76015 456 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 STK10O94804 968 aaKnown RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 GRNP28799 593 aaKnown RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 AKT1P31749 480 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 FNTAP49354 379 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 PRKAA1Q13131 559 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 CYP1B1Q16678 543 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 SP5Q6BEB4 398 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 ZNF572Q7Z3I7 529 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 MRGPREQ86SM8 312 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 CUZD1Q86UP6 607 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 ZADH2Q8N4Q0 377 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 PRELID2Q8N945 189 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 CLEC1AQ8NC01 280 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 SLC35B2Q8TB61 432 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 MAGOHBQ96A72 148 aaKnown RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 LRFN5Q96NI6 719 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 IL26Q9NPH9 171 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms