RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 C1QTNF3-AMACRE9PGA6 284 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 H3BNX3 289 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 AREL1O15033 823 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 STAMBPO95630 424 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 GSTM1P09488 218 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 ADRB3P13945 408 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 EIF2DP41214 584 aaKnown RBP22.75■■□□□ 1.23
MSX2-201ENST00000239243 POLR2JP52435 117 aaKnown RBP22.75■■□□□ 1.23
MSX2-201ENST00000239243 GSTM4Q03013 218 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 AP5B1Q2VPB7 878 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 SPATS1Q496A3 300 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 RASGEF1AQ8N9B8 481 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 ACTR8Q9H981 624 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 SLC52A3Q9NQ40 469 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 KLQ9UEF7 1012 aa22.75■■□□□ 1.23
MSX2-201ENST00000239243 LEF1Q9UJU2 399 aaPredicted RBP22.75■■□□□ 1.23
MSX2-201ENST00000239243 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 CCDC154A6NI56 674 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 SPINT1O43278 529 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 KRT6AP02538 564 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 KRT6BP04259 564 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 TCN1P20061 433 aaPredicted RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 SLC6A12P48065 614 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 KRT6CP48668 564 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 PRKG2Q13237 762 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 GGTA1PQ4G0N0 100 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 TRIM46Q7Z4K8 759 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 RASGRP3Q8IV61 690 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 MRPL38Q96DV4 380 aaKnown RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 FAM129BQ96TA1 746 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 CCM2Q9BSQ5 444 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 RNF11Q9Y3C5 154 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 EEDO75530 441 aaKnown RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 MAP4P27816 1152 aaKnown RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 MSX2P35548 267 aaPredicted RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 SLC7A2P52569 658 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 UFM1P61960 85 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 BEND7Q8N7W2 519 aaPredicted RBP22.74■■□□□ 1.23
MSX2-201ENST00000239243 NUS1Q96E22 293 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 SLC28A3Q9HAS3 691 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 ABCD2Q9UBJ2 740 aa22.74■■□□□ 1.23
MSX2-201ENST00000239243 PRORSD1PA6NEY8 169 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 GRXCR2A6NFK2 248 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 IFRD1O00458 451 aaPredicted RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 TSPAN6O43657 245 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 OPRD1P41143 372 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 CREB5Q02930 508 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 IMPG1Q17R60 797 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 NUDT18Q6ZVK8 323 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 USP7Q93009 1102 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 P2RY13Q9BPV8 354 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 ZNF490Q9ULM2 529 aaPredicted RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 EIF3LQ9Y262 564 aaKnown RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 LRCH1Q9Y2L9 728 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 CCL27Q9Y4X3 112 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 COL4A3Q01955 1670 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 TCF20Q9UGU0 1960 aaKnown RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 NPPAP01160 153 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 GJA4P35212 333 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 MRPS22P82650 360 aaKnown RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 ZNF648Q5T619 568 aaPredicted RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 ERN2Q76MJ5 926 aaKnown RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 TMEM126BQ8IUX1 230 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 PROKR1Q8TCW9 393 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 RAB7BQ96AH8 199 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 LRRC58Q96CX6 371 aa22.73■■□□□ 1.23
MSX2-201ENST00000239243 THAP10Q9P2Z0 257 aaPredicted RBP22.73■■□□□ 1.23
MSX2-201ENST00000239243 MANBAO00462 879 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 FFAR3O14843 346 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 CASQ2O14958 399 aaPredicted RBP22.72■■□□□ 1.23
MSX2-201ENST00000239243 GPR42O15529 346 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 PSIP1O75475 530 aaKnown RBP22.72■■□□□ 1.23
MSX2-201ENST00000239243 RECQL5O94762 991 aaPredicted RBP22.72■■□□□ 1.23
MSX2-201ENST00000239243 METAP1P53582 386 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 DPTQ07507 201 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 PTCHD3Q3KNS1 767 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 TMEM52BQ4KMG9 183 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 ANKRD54Q6NXT1 300 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 RNF111Q6ZNA4 994 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 NLRP8Q86W28 1048 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 SPATA24Q86W54 205 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 GALNT13Q8IUC8 556 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 PQLC1Q8N2U9 271 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 FAM156AQ8NDB6 213 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 ATL1Q8WXF7 558 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 FBXL8Q96CD0 374 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 TEX37Q96LM6 180 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 HBEGFQ99075 208 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 DNAJC11Q9NVH1 559 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 INPP4BO15327 924 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 LZTS3O60299 673 aaPredicted RBP22.72■■□□□ 1.23
MSX2-201ENST00000239243 C6P13671 934 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 ZFP36L2P47974 494 aaKnown RBP22.72■■□□□ 1.23
MSX2-201ENST00000239243 CTSCP53634 463 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 IL23RQ5VWK5 629 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 CYP20A1Q6UW02 462 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 ZFAND4Q86XD8 727 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 SNX6Q9UNH7 406 aa22.72■■□□□ 1.23
MSX2-201ENST00000239243 C9JVG2 144 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms