RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ASPSCR1Q9BZE9 553 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 MAGIXQ9H6Y5 334 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 VNN3Q9NY84 501 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 POU2F3Q9UKI9 436 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 DRGXA6NNA5 263 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 SERPINA1P01009 418 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 ZNF24P17028 368 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 GRK3P35626 688 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 TRIP4Q15650 581 aaPredicted RBP15.22■□□□□ 0.03
DDX55-201ENST00000238146 GCNT7Q6ZNI0 430 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 PAGE2Q7Z2X7 111 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 SLC7A5P1Q8MH63 180 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 RHOXF1Q8NHV9 184 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 RMDN1Q96DB5 314 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 ZBTB18Q99592 522 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 BARD1Q99728 777 aaKnown RBP15.22■□□□□ 0.03
DDX55-201ENST00000238146 SARS2Q9NP81 518 aaKnown RBP15.22■□□□□ 0.03
DDX55-201ENST00000238146 ZMYM5Q9UJ78 669 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 TPRKBQ9Y3C4 175 aa15.22■□□□□ 0.03
DDX55-201ENST00000238146 GPR182O15218 404 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 SEC24AO95486 1093 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 MT-ND2P03891 347 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 IGFBP5P24593 272 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 CD40LGP29965 261 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 GGT5P36269 586 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 GSSP48637 474 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 PPP5CP53041 499 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 GTF2H2Q13888 395 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 GBX1Q14549 363 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 PCBP2Q15366 365 aaKnown RBP eCLIP15.21■□□□□ 0.03
DDX55-201ENST00000238146 GTF2H2CQ6P1K8 395 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 NEK10Q6ZWH5 1172 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 LRRC8DQ7L1W4 858 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 C10orf111Q8N326 155 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 TRIB2Q92519 343 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
DDX55-201ENST00000238146 KAT8Q9H7Z6 458 aaKnown RBP15.21■□□□□ 0.03
DDX55-201ENST00000238146 PDFQ9HBH1 243 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 SLC6A13Q9NSD5 602 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 NUDT4Q9NZJ9 180 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 SCML2Q9UQR0 700 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 PKP3Q9Y446 797 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 MOXD2PA6NHM9 499 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 ZBBXA8MT70 800 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 ARVCFO00192 962 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 PGRP06401 933 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 CYP4B1P13584 511 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 TGFBR1P36897 503 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 GPR15P49685 360 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 ST13P50502 369 aaKnown RBP15.21■□□□□ 0.03
DDX55-201ENST00000238146 HUNKP57058 714 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 MRPS6P82932 125 aaKnown RBP15.21■□□□□ 0.03
DDX55-201ENST00000238146 TRAF3Q13114 568 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 LAPTM4AQ15012 233 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 TAF1AQ15573 450 aaPredicted RBP15.21■□□□□ 0.03
DDX55-201ENST00000238146 DDR2Q16832 855 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 CPZQ66K79 652 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 ARMC8Q8IUR7 673 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 SETD9Q8NE22 299 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 LGALS12Q96DT0 336 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 PPP3R2Q96LZ3 170 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 CTRCQ99895 268 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 SH3GL1Q99961 368 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 DSN1Q9H410 356 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 ZNF229Q9UJW7 825 aa15.21■□□□□ 0.03
DDX55-201ENST00000238146 IQCF5A8MTL0 148 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 NTRK1P04629 796 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CD9P21926 228 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CLK3P49761 638 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 YBEYP58557 167 aaPredicted RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 SLC13A2Q13183 592 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 SLC39A12Q504Y0 691 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 ALG1LQ6GMV1 187 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 MIB1Q86YT6 1006 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 KRTCAP2Q8N6L1 136 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 PSMA8Q8TAA3 256 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 DPY30Q9C005 99 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 RIBC2Q9H4K1 309 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 IPPKQ9H8X2 491 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 THG1LQ9NWX6 298 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 ABI2Q9NYB9 513 aaPredicted RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 FKBPLQ9UIM3 349 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 TSR3Q9UJK0 312 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 EIF3LQ9Y262 564 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 FNDC3AQ9Y2H6 1198 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 MYO16Q9Y6X6 1858 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 TRBV5-3A0A0A0MS03 114 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 FADS2O95864 444 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 HMBSP08397 361 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 MC4RP32245 332 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 EIF2DP41214 584 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 RGRP47804 291 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 CXCR4P61073 352 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 SMN1Q16637 294 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 CAPN13Q6MZZ7 669 aaPredicted RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 SHQ1Q6PI26 577 aaKnown RBP15.2■□□□□ 0.02
DDX55-201ENST00000238146 PRSS48Q7RTY5 328 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 MILR1Q7Z6M3 343 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 LGI2Q8N0V4 545 aa15.2■□□□□ 0.02
DDX55-201ENST00000238146 KCNJ9Q92806 393 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms