RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SERPINB11Q96P15 392 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 ACTL7BQ9Y614 415 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 TM7SF2O76062 418 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 PTNP21246 168 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 OR3A3P47888 321 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 OR3A2P47893 321 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 ENTPD1P49961 510 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 KLHL26Q53HC5 615 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 XRRA1Q6P2D8 792 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 HTR3CQ8WXA8 447 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 FUZQ9BT04 418 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 WACQ9BTA9 647 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 TLR10Q9BXR5 811 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 CHST7Q9NS84 486 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 ITGA11Q9UKX5 1188 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 HDAC3O15379 428 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 H6PDO95479 791 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 POU2F1P14859 743 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 AXLP30530 894 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 DRG2P55039 364 aaKnown RBP10.94□□□□□ -0.66
MSH6-201ENST00000234420 PSMA6P60900 246 aaKnown RBP10.94□□□□□ -0.66
MSH6-201ENST00000234420 NDUFA9Q16795 377 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 MKL1Q969V6 931 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 SGK2Q9HBY8 427 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 MAGEL2Q9UJ55 1249 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 KCNE2Q9Y6J6 123 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 B8ZZF3 427 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 NOBOXO60393 691 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 PEX10O60683 326 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 WDPCPO95876 746 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 CSF2P04141 144 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 ASLP04424 464 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 TLE2Q04725 743 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 LRRC37A5PQ49AS3 106 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 TREML2Q5T2D2 321 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 AKR1C8PQ5T2L2 129 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 CD302Q8IX05 232 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 LPGAT1Q92604 370 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 THRSPQ92748 146 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 PPM1MQ96MI6 270 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 ULBP1Q9BZM6 244 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 STRADBQ9C0K7 418 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 COQ10BQ9H8M1 238 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 PRMT8Q9NR22 394 aaPredicted RBP10.94□□□□□ -0.66
MSH6-201ENST00000234420 GSKIPQ9P0R6 139 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 NOP16Q9Y3C1 178 aaKnown RBP10.94□□□□□ -0.66
MSH6-201ENST00000234420 CCDC88CQ9P219 2028 aa10.94□□□□□ -0.66
MSH6-201ENST00000234420 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 MYH15Q9Y2K3 1946 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 A0A0J9YYE9 177 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 PCDHGA12O60330 932 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 OTX2P32243 289 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 SLC27A1Q6PCB7 646 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ARSKQ6UWY0 536 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 RBM12BQ8IXT5 1001 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 TOMM5Q8N4H5 51 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 OR2T12Q8NG77 320 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 C7orf34Q96L11 122 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ZNF607Q96SK3 696 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 MIPEPQ99797 713 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 SGIP1Q9BQI5 828 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ERVK-5Q9HDB9 667 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ABCC13Q9NSE7 274 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 DKKL1Q9UK85 242 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 SPATA31E1Q6ZUB1 1445 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TSTD3H0UI37 97 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 POLR1CO15160 346 aaPredicted RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 OR1F1O43749 312 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TNFP01375 233 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 LCKP06239 509 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 LTA4HP09960 611 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 PPATQ06203 517 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 NRKQ7Z2Y5 1582 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 KIAA0319LQ8IZA0 1049 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 OR7G2Q8NG99 324 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 GTPBP3Q969Y2 492 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 DPAGT1Q9H3H5 408 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 PDPK1O15530 556 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ACSL1P33121 698 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ZNF132P52740 706 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 FGL2Q14314 439 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 EXOC3L2Q2M3D2 409 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ADGRD2Q7Z7M1 963 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 POC1BQ8TC44 478 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 STK35Q8TDR2 534 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 MFSD3Q96ES6 412 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 BORCS8Q96FH0 119 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 MRPL45Q9BRJ2 306 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 SRMSQ9H3Y6 488 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 DNAJC18Q9H819 358 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 ITM2CQ9NQX7 267 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 KLRF1Q9NZS2 232 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 DDTLA6NHG4 134 aaPredicted RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 H3BSA7 217 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 SERPINB7O75635 380 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TGM6O95932 706 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 CYP17A1P05093 508 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 CAV3P56539 151 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms