RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CYS1Q717R9 158 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CCDC25Q86WR0 208 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 ANKMY2Q8IV38 441 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 IFT20Q8IY31 132 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 TBC1D21Q8IYX1 336 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 SLC22A15Q8IZD6 547 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 RAB42Q8N4Z0 105 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 C2CD4AQ8NCU7 369 aaPredicted RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 ACVR1CQ8NER5 493 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 OR4D9Q8NGE8 314 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 FBXO25Q8TCJ0 367 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 MAGEC3Q8TD91 643 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 NAT14Q8WUY8 206 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 NCSTNQ92542 709 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 KCNJ9Q92806 393 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CCDC97Q96F63 343 aaPredicted RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 ZDHHC12Q96GR4 267 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 RMDN2Q96LZ7 410 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 PWWP2AQ96N64 755 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 BIRC8Q96P09 236 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 CMKLR1Q99788 373 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 TRIM56Q9BRZ2 755 aaKnown RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 KIR3DX1Q9H7L2 352 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 FBXO6Q9NRD1 293 aaPredicted RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 TXNDC16Q9P2K2 825 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 ASF1AQ9Y294 204 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 RP1P56715 2156 aa11□□□□□ -0.65
SF3B6-201ENST00000233468 ASH1LQ9NR48 2969 aaKnown RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
SF3B6-201ENST00000233468 CCDC187A0A096LP49 1063 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 MATN2O00339 956 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 HGSO14964 777 aaPredicted RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 TOX3O15405 576 aaPredicted RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 VPS26AO75436 327 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 GPC4O75487 556 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 SLCO2B1O94956 709 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 CD46P15529 392 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 ITGB6P18564 788 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 ATP5DP30049 168 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 CCR7P32248 378 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 MAGEA4P43358 317 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 PREPP48147 710 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 GPR18Q14330 331 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 RTP5Q14D33 572 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 BRD3Q15059 726 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 ZNF658BQ4V348 819 aaPredicted RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 CTSL3PQ5NE16 218 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 PHF19Q5T6S3 580 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 TEDDM1Q5T9Z0 273 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 LRRC8EQ6NSJ5 796 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 UNC5DQ6UXZ4 953 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 C3orf62Q6ZUJ4 267 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 USP53Q70EK8 1073 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 SLC26A11Q86WA9 606 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 OOSP2Q86WS3 158 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 ZNF761Q86XN6 746 aaPredicted RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 IGDCC3Q8IVU1 814 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 DENND6AQ8IWF6 608 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 ZBTB2Q8N680 514 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 NOA1Q8NC60 698 aaKnown RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 WDR36Q8NI36 951 aaKnown RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 SKA2Q8WVK7 121 aaPredicted RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 IFT81Q8WYA0 676 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 LIN37Q96GY3 246 aaPredicted RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 TBC1D10AQ9BXI6 508 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 LATS2Q9NRM7 1088 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 TAS2R13Q9NYV9 303 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 IL1RAPL1Q9NZN1 696 aa10.99□□□□□ -0.65
SF3B6-201ENST00000233468 CFAP20Q9Y6A4 193 aaKnown RBP10.99□□□□□ -0.65
SF3B6-201ENST00000233468 ZNF462Q96JM2 2506 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ESYT3A0FGR9 886 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 IQCF5A8MTL0 148 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ESPNB1AK53 854 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 EIF3FO00303 357 aaPredicted RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 HAUS5O94927 633 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 CBSLP0DN79 551 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ENO3P13929 434 aaPredicted RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 RBMS1P29558 406 aaKnown RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 PDHA2P29803 388 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 STX2P32856 288 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 CSTF2P33240 577 aaKnown RBP eCLIP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 PHBP35232 272 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 CBSP35520 551 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 CCNFP41002 786 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 CAPZBP47756 277 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 LIMK2P53671 638 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ZFP36L1Q07352 338 aaKnown RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 NKAIN2Q5VXU1 208 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 CYB5D1Q6P9G0 228 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 PCSK4Q6UW60 755 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ZDHHC24Q6UX98 284 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 NEK10Q6ZWH5 1172 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 KRT222Q8N1A0 295 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 LILRA3Q8N6C8 439 aaPredicted RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 PHC3Q8NDX5 983 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 OR5K2Q8NHB8 316 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 LCN9Q8WX39 176 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 INPP5DQ92835 1189 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 NAF1Q96HR8 494 aaKnown RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 UBL7Q96S82 380 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms