RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PRKG2Q13237 762 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 INTS6LQ5JSJ4 861 aaKnown RBP13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 FAM205BPQ63HN1 556 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 DET1Q7L5Y6 550 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 CDH24Q86UP0 819 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 TRIM48Q8IWZ4 208 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 FAM109AQ8N4B1 249 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 FYTTD1Q96QD9 318 aaKnown RBP13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 COMMD8Q9NX08 183 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ERVK13-1Q9NX77 482 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 LOC100130705A0A1B0GUX0 176 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ISPDA4D126 451 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 B8ZZF3 427 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ECI2O75521 394 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 RECQL5O94762 991 aaPredicted RBP13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 DNAJB2P25686 324 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 HTR6P50406 440 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 NKG7Q16617 165 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ZNF404Q494X3 552 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 SPANXN2Q5MJ10 180 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 AMIGO1Q86WK6 493 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 METTL6Q8TCB7 284 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 GTF2H4Q92759 462 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 MUL1Q969V5 352 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 MYLPFQ96A32 169 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 L3HYPDHQ96EM0 354 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 EXOC2Q96KP1 924 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 TMLHEQ9NVH6 421 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 EHD3Q9NZN3 535 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 LCTP09848 1927 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 OR6C70A6NIJ9 312 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ANGPTL1O95841 491 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 PRLP01236 227 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 RAP2AP10114 183 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ZNF37AP17032 561 aaPredicted RBP13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 CBLP22681 906 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ATP4BP51164 291 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 CDC20Q12834 499 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 RCAN2Q14206 197 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 IHHQ14623 411 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 PTGR1Q14914 329 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 SIRPB2Q5JXA9 342 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 SLX4IPQ5VYV7 408 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 PIK3C3Q8NEB9 887 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 OR2T12Q8NG77 320 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 HMCESQ96FZ2 354 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 SMOC2Q9H3U7 446 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ZBTB20Q9HC78 741 aaPredicted RBP13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 VPS4AQ9UN37 437 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 ACTL7AQ9Y615 435 aa13.91□□□□□ -0.18
PCDHB3-201ENST00000231130 SAGE2PA6NJ88 616 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 H0YAE9 185 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 SLC1A7O00341 560 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 UMPSP11172 480 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 RAPSNQ13702 412 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 GTDC1Q4AE62 458 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 KANK2Q63ZY3 851 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 GALNT10Q86SR1 603 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 ZNF540Q8NDQ6 660 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 PROKR1Q8TCW9 393 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 UBE2FQ969M7 185 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 TMEM209Q96SK2 561 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 GPR21Q99679 349 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 ACTR8Q9H981 624 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 FBXO8Q9NRD0 319 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 QPCTLQ9NXS2 382 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 TAS2R9Q9NYW1 312 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 DNMT3LQ9UJW3 386 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 UPK1AO00322 258 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 TNFRSF21O75509 655 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 CNMDO75829 334 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 GUCA1CO95843 209 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 ETV3P41162 512 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 C6orf136Q5SQH8 315 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 PRAMEF19Q5SWL8 479 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 TMEM179BQ7Z7N9 219 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 MTFMTQ96DP5 389 aaKnown RBP13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 SLC47A1Q96FL8 570 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 C2orf49Q9BVC5 232 aaPredicted RBP13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 RANGRFQ9HD47 186 aaPredicted RBP13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 RWDD3Q9Y3V2 267 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 ORC6Q9Y5N6 252 aa13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 ZNF646O15015 1829 aaPredicted RBP13.9□□□□□ -0.18
PCDHB3-201ENST00000231130 NFKBIEO00221 500 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 POLR1CO15160 346 aaPredicted RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 SLC2A4P14672 509 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 BCL7AQ4VC05 210 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 MIB1Q86YT6 1006 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 BPIFA1Q9NP55 256 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 AIG1Q9NVV5 245 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 VAPAQ9P0L0 249 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 NUFIP1Q9UHK0 495 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 DERAQ9Y315 318 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms