RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 UBAP2Q5T6F2 1119 aaKnown RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 TEDDM1Q5T9Z0 273 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 ZNF470Q6ECI4 717 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 FOXR1Q6PIV2 292 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 PRSS42Q7Z5A4 293 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 DTX1Q86Y01 620 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 AVL9Q8NBF6 648 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 C2CD4AQ8NCU7 369 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 OR4E2Q8NGC2 313 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 ART4Q93070 314 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.34□□□□□ -0.277e-6■■■■■ 27.5
VEGFA-201ENST00000230480 FAM136AQ96C01 138 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 SLC41A2Q96JW4 573 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 TGM7Q96PF1 710 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 FERD3LQ96RJ6 166 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 MAP3K3Q99759 626 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 DPYSL5Q9BPU6 564 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 IARS2Q9NSE4 1012 aaKnown RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 C20orf96Q9NUD7 363 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-201ENST00000230480 SPHK1Q9NYA1 384 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 WHRNQ9P202 907 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 ANAPC5Q9UJX4 755 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 CHMP2BQ9UQN3 213 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 PCDHGA3Q9Y5H0 932 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 B3GALT1Q9Y5Z6 326 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 MRFAP1Q9Y605 127 aa13.34□□□□□ -0.27
VEGFA-201ENST00000230480 OR6C74A6NCV1 312 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 B4E171 279 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 BTN3A1O00481 513 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 HCRTR1O43613 425 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 PRICKLE3O43900 615 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 NDUFS3O75489 264 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 PIAS1O75925 651 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 PKMP14618 531 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 WT1P19544 449 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 TSPAN7P41732 249 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 MLLT3P42568 568 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 MC2RQ01718 297 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 GUCY2DQ02846 1103 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 ABRQ12979 859 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 CLN3Q13286 438 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 BIRC2Q13490 618 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 ACSBG2Q5FVE4 666 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 AARS2Q5JTZ9 985 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 RBM20Q5T481 1227 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 MRNIPQ6NTE8 343 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 FAM92BQ6ZTR7 304 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 KCNMB4Q86W47 210 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 LRRC6Q86X45 466 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 ZFAND4Q86XD8 727 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 ANKMY2Q8IV38 441 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 LINC01555Q8NAE3 123 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 DENND1AQ8TEH3 1009 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 AHCYL2Q96HN2 611 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 STRADBQ9C0K7 418 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 ZNF768Q9H5H4 540 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 STN1Q9H668 368 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 MVB12BQ9H7P6 319 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 ZDHHC18Q9NUE0 388 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 HRASLS2Q9NWW9 162 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 CIDEBQ9UHD4 219 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
VEGFA-201ENST00000230480 PLAGL1Q9UM63 463 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 PSAT1Q9Y617 370 aa13.33□□□□□ -0.28
VEGFA-201ENST00000230480 UBA6A0AVT1 1052 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 EFCAB7A8K855 629 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 QSOX1O00391 747 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 MATN4O95460 622 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 ESR1P03372 595 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 FOLR1P15328 257 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 ZNF28P17035 718 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 AMD1P17707 334 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 POLR2CP19387 275 aaPredicted RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 GPX6P59796 221 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 FRG1Q14331 258 aaKnown RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 KCNAB1Q14722 419 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 ZIC1Q15915 447 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 HIF1AQ16665 826 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 KYNUQ16719 465 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 SPANXN3Q5MJ09 141 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 ANKS6Q68DC2 871 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 PTRHD1Q6GMV3 140 aaKnown RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 TIPARPQ7Z3E1 657 aaKnown RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 PLXDC1Q8IUK5 500 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 SPACA3Q8IXA5 215 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 LSMEM2Q8N112 164 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 MMGT1Q8N4V1 131 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 LRRN4CLQ8ND94 238 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 AGBL5Q8NDL9 886 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 OR5K2Q8NHB8 316 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 FBXO25Q8TCJ0 367 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 TMEM159Q96B96 161 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 RNF31Q96EP0 1072 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 CERS2Q96G23 380 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 IL17FQ96PD4 163 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 CMKLR1Q99788 373 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms