RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CORO1BQ9BR76 489 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 CNPPD1Q9BV87 410 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 NLNQ9BYT8 704 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 SPRTNQ9H040 489 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 DCSTAMPQ9H295 470 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
NFKB1-201ENST00000226574 WBP11Q9Y2W2 641 aaKnown RBP13.5□□□□□ -0.25
NFKB1-201ENST00000226574 UGT2B11O75310 529 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 STC1P52823 247 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CSNK2BP67870 215 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CYS1Q717R9 158 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 FAM110BQ8TC76 370 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 IGSF8Q969P0 613 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 SNTG1Q9NSN8 517 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CMTM6Q9NX76 183 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 SLC22A14Q9Y267 594 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 SCELO95171 688 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 NR2F1P10589 423 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CD1EP15812 388 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 BUD31P41223 144 aaPredicted RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 IL18R1Q13478 541 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 KCNA10Q16322 511 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 NOL9Q5SY16 702 aaKnown RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 C10orf53Q8N6V4 93 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 RHBGQ9H310 441 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 RPRD1BQ9NQG5 326 aaKnown RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 RIMS3Q9UJD0 308 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CLIC1O00299 241 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 GJB3O75712 270 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 ESR1P03372 595 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CKBP12277 381 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 GJA1P17302 382 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 GABRR2P28476 465 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 SNRPD1P62314 119 aaKnown RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 C2orf80Q0P641 193 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 RAB42Q8N4Z0 105 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 SLC15A4Q8N697 577 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 NKIRAS2Q9NYR9 191 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 VPS51Q9UID3 782 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CLDN7O95471 211 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
NFKB1-201ENST00000226574 ARRB2P32121 409 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 OR1E2P47887 323 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 TUBA4AP68366 448 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CMPK2Q5EBM0 449 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF366Q8N895 744 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 OR10T2Q8NGX3 314 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 EQTNQ9NQ60 294 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 STMN3Q9NZ72 180 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 PRKAG2Q9UGJ0 569 aa13.49□□□□□ -0.25
NFKB1-201ENST00000226574 CEP290O15078 2479 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 PTGESO14684 152 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CREG1O75629 220 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 PTGER3P43115 390 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 NFKB2Q00653 900 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 FAM110CQ1W6H9 321 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 KRT74Q7RTS7 529 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 KRT73Q86Y46 540 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 KIAA1191Q96A73 305 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 DIRAS2Q96HU8 199 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 WDR6Q9NNW5 1121 aaKnown RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CCNB1IP1Q9NPC3 277 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ASF1AQ9Y294 204 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CCDC182A6NF36 153 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 MAGEB17A8MXT2 336 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 MITFO75030 526 aaPredicted RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 IL1BP01584 269 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CYP11A1P05108 521 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 PABPC1P11940 636 aaKnown RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 KCNE1P15382 129 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CD1DP15813 335 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 GTF2E2P29084 291 aaKnown RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 RFC2P35250 354 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 GSTM5P46439 218 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CACNG1Q06432 222 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CES4AQ5XG92 561 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ENPP6Q6UWR7 440 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 LUZP2Q86TE4 346 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF280BQ86YH2 543 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 CAMKK2Q96RR4 588 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 TTPALQ9BTX7 342 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 NFKBIZQ9BYH8 718 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 DNAJC11Q9NVH1 559 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 FBP2O00757 339 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 LDB2O43679 373 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ITGB1P05556 798 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ENGP17813 658 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 OGNP20774 298 aaKnown RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 MOGQ16653 247 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms